RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 ARHGEF3Q9NR81 526 aa6.88□□□□□ -1.31
CTNNB1-213ENST00000482042 DDX56Q9NY93 547 aaKnown RBP6.88□□□□□ -1.31
CTNNB1-213ENST00000482042 RCOR3Q9P2K3 495 aaPredicted RBP6.88□□□□□ -1.31
CTNNB1-213ENST00000482042 DEC1Q9P2X7 70 aa6.88□□□□□ -1.31
CTNNB1-213ENST00000482042 FZD10Q9ULW2 581 aa6.88□□□□□ -1.31
CTNNB1-213ENST00000482042 USP18Q9UMW8 372 aa6.88□□□□□ -1.31
CTNNB1-213ENST00000482042 PIAS3Q9Y6X2 628 aa6.88□□□□□ -1.31
CTNNB1-213ENST00000482042 XIRP2A4UGR9 3374 aa6.88□□□□□ -1.31
CTNNB1-213ENST00000482042 COL6A3P12111 3177 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 KANSL1LA0AUZ9 987 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 B2RBV5 119 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 E9PAM4 449 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 NEDD8-MDP1E9PL57 170 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 H0Y626 953 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 TRDMT1O14717 391 aaKnown RBP6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 PSTPIP1O43586 416 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 TIMM44O43615 452 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 NARSO43776 548 aaKnown RBP6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 SPOPO43791 374 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 LRCH4O75427 683 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 GJB6O95452 261 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 PENKP01210 267 aaPredicted RBP6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 KLKB1P03952 638 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 TYRP14679 529 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 ARSAP15289 507 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 MIPP30301 263 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 SSR1P43307 286 aaKnown RBP6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 TNFRSF4P43489 277 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 HCAR3P49019 387 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 PITX1P78337 314 aaPredicted RBP6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 GRSF1Q12849 480 aaKnown RBP eCLIP6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 DMC1Q14565 340 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 EIF4HQ15056 248 aaKnown RBP6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 PDK2Q15119 407 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 FAM133BQ5BKY9 247 aaKnown RBP6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 LY6G5CQ5SRR4 150 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 ZFYVE27Q5T4F4 411 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 LRRC38Q5VT99 294 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 OTUD1Q5VV17 481 aaPredicted RBP6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 RAP1GAP2Q684P5 730 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 TRIM68Q6AZZ1 485 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 GRAMD4Q6IC98 578 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 TRNP1Q6NT89 227 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 ZNF783Q6ZMS7 281 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 TPGS1Q6ZTW0 290 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 TPRG1Q6ZUI0 275 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 TRMT11Q7Z4G4 463 aaKnown RBP6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 BMP8AQ7Z5Y6 402 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 SETD3Q86TU7 594 aaPredicted RBP6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 VSIG1Q86XK7 387 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 RHOT1Q8IXI2 618 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 LGI2Q8N0V4 545 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 TP53I13Q8NBR0 393 aaPredicted RBP6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 ACRBPQ8NEB7 543 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 KIAA1524Q8TCG1 905 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 TBC1D31Q96DN5 1066 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 ZFYVE19Q96K21 471 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 LRRC3BQ96PB8 259 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 PRMT1Q99873 361 aaKnown RBP6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 P2RY13Q9BPV8 354 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 SIK2Q9H0K1 926 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 LINC00597Q9H2U6 94 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 HEBP1Q9NRV9 189 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 GTSE1Q9NYZ3 720 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 OR12D3Q9UGF7 316 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 FBXO10Q9UK96 956 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 AMFRQ9UKV5 643 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 CA14Q9ULX7 337 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 SLC27A6Q9Y2P4 619 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 HS3ST4Q9Y661 456 aa6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 TP53BP1Q12888 1972 aaPredicted RBP6.87□□□□□ -1.31
CTNNB1-213ENST00000482042 PRUNE2Q8WUY3 3088 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 IGLV3-10A0A075B6K4 115 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 CXorf51AA0A1B0GTR3 108 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 FAM170AA1A519 330 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 CCDC66A2RUB6 948 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 DRGXA6NNA5 263 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 MIF4GDA9UHW6 222 aaKnown RBP6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 ZNF487B1APH4 448 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 EEF2KO00418 725 aaKnown RBP6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 FFAR3O14843 346 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 DAPK3O43293 454 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 SUSD5O60279 629 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 TSPAN3O60637 253 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 TBL1XO60907 577 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 ATG13O75143 517 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 LUC7L3O95232 432 aaKnown RBP6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 PLA2G1BP04054 148 aaKnown RBP6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 ASLP04424 464 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 PMLP29590 882 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 SLC6A4P31645 630 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 SERPINB6P35237 376 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 GRIA2P42262 883 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 TPI1P60174 286 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 MRPS21P82921 87 aaKnown RBP6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 OGDHQ02218 1023 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 SULT2A1Q06520 285 aa6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 ZNF177Q13360 481 aaPredicted RBP6.86□□□□□ -1.31
CTNNB1-213ENST00000482042 CDH18Q13634 790 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms