RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 SLC11A2P49281 568 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 MRPS35P82673 323 aaKnown RBP14.56□□□□□ -0.08
CHD3-211ENST00000481999 SMAD3P84022 425 aaKnown RBP14.56□□□□□ -0.08
CHD3-211ENST00000481999 FAM219BQ5XKK7 198 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 CAPRIN2Q6IMN6 1127 aaKnown RBP14.56□□□□□ -0.08
CHD3-211ENST00000481999 LRRC74BQ6ZQY2 392 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 GAREM2Q75VX8 874 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 PTAR1Q7Z6K3 402 aaPredicted RBP14.56□□□□□ -0.08
CHD3-211ENST00000481999 PPHLN1Q8NEY8 458 aaKnown RBP14.56□□□□□ -0.08
CHD3-211ENST00000481999 OR13J1Q8NGT2 312 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 ADAMTS19Q8TE59 1207 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 EBF4Q9BQW3 602 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 MRPL17Q9NRX2 175 aaKnown RBP14.56□□□□□ -0.08
CHD3-211ENST00000481999 TREX1Q9NSU2 369 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 PLA2G4CQ9UP65 541 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.56□□□□□ -0.08
CHD3-211ENST00000481999 PRR5-ARHGAP8B1AHC4 643 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 TK2O00142 265 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 ATXN1LP0C7T5 689 aaKnown RBP14.55□□□□□ -0.08
CHD3-211ENST00000481999 PRSS56P0CW18 603 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 SPRP35270 261 aaPredicted RBP14.55□□□□□ -0.08
CHD3-211ENST00000481999 ARHGAP8P85298 464 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 IL10RBQ08334 325 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 ZNF235Q14590 738 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 PARP15Q460N3 678 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 CNSTQ6PJW8 725 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 TEX26Q8N6G2 289 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 PPFIBP2Q8ND30 876 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 FBXO27Q8NI29 283 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 BLOC1S5Q8TDH9 187 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 PPP4R1Q8TF05 950 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 FAM136AQ96C01 138 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 MYRFLQ96LU7 910 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 MZF1P28698 734 aaPredicted RBP14.55□□□□□ -0.08
CHD3-211ENST00000481999 CCR10P46092 362 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 SCNN1BP51168 640 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 RAB33AQ14088 237 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 RBM20Q5T481 1227 aaKnown RBP14.55□□□□□ -0.08
CHD3-211ENST00000481999 RAPH1Q70E73 1250 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 DDX53Q86TM3 631 aaKnown RBP14.55□□□□□ -0.08
CHD3-211ENST00000481999 ULK2Q8IYT8 1036 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 KLHL23Q8NBE8 558 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 AGR3Q8TD06 166 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 NRG4Q8WWG1 115 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 KLF16Q9BXK1 252 aaPredicted RBP14.55□□□□□ -0.08
CHD3-211ENST00000481999 IL21Q9HBE4 155 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 APOBEC2Q9Y235 224 aaKnown RBP14.55□□□□□ -0.08
CHD3-211ENST00000481999 LRCH1Q9Y2L9 728 aa14.55□□□□□ -0.08
CHD3-211ENST00000481999 MAGEB16A2A368 324 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 A6NHS1 94 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 KLHL2O95198 593 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 PROCP04070 461 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 PAX7P23759 505 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 SERPINH1P50454 418 aaKnown RBP14.54□□□□□ -0.08
CHD3-211ENST00000481999 MXRA7P84157 204 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 KLC1Q07866 573 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 UBAP2LQ14157 1087 aaKnown RBP14.54□□□□□ -0.08
CHD3-211ENST00000481999 PDPK2PQ6A1A2 396 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 CXorf57Q6NSI4 855 aaKnown RBP14.54□□□□□ -0.08
CHD3-211ENST00000481999 DTX3LQ8TDB6 740 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 SLC22A17Q8WUG5 538 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 SCG3Q8WXD2 468 aaKnown RBP14.54□□□□□ -0.08
CHD3-211ENST00000481999 SPDL1Q96EA4 605 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 ATP13A1Q9HD20 1204 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 HCFC1R1Q9NWW0 138 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 MARCH4Q9P2E8 410 aaPredicted RBP14.54□□□□□ -0.08
CHD3-211ENST00000481999 ANGPTL2Q9UKU9 493 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 CLEC4EQ9ULY5 219 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 HIDE1A8MVS5 230 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 C1RP00736 705 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 PDHA1P08559 390 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 GABRR2P28476 465 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 TUBB3Q13509 450 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 ITGA9Q13797 1035 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 USP10Q14694 798 aaKnown RBP14.54□□□□□ -0.08
CHD3-211ENST00000481999 VEPH1Q14D04 833 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 TMCO4Q5TGY1 634 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 TPGS2Q68CL5 300 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 NAPRTQ6XQN6 538 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 CARNMT1Q8N4J0 409 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 OR13C4Q8NGS5 318 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 KCTD4Q8WVF5 259 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 THTPAQ9BU02 230 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 HERC2P3Q9BVR0 1158 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 FNDC3AQ9Y2H6 1198 aaKnown RBP14.54□□□□□ -0.08
CHD3-211ENST00000481999 PCDHGC4Q9Y5F7 938 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 CPQQ9Y646 472 aa14.54□□□□□ -0.08
CHD3-211ENST00000481999 PLXNA4Q9HCM2 1894 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.53□□□□□ -0.08
CHD3-211ENST00000481999 F11P03951 625 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 MYL4P12829 197 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 LAG3P18627 525 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 MAPKAPK2P49137 400 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 SERPINB8P50452 374 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 ERVFC1P60507 584 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 ACTR3P61158 418 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 RABGAP1LQ5R372 815 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 ADGRF1Q5T601 910 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 RNF219Q5W0B1 726 aaPredicted RBP14.53□□□□□ -0.08
CHD3-211ENST00000481999 POTEHQ6S545 545 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms