RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 EXOC3O60645 756 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 USP12O75317 370 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 AKAP3O75969 853 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 C8AP07357 584 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 IDUAP35475 653 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 SLC16A2P36021 539 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 CASRP41180 1078 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 CASP3P42574 277 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 PTPN9P43378 593 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 OLR1P78380 273 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 NPRL3Q12980 569 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 ALCAMQ13740 583 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 LINC00696Q6ZRV3 163 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 NLRX1Q86UT6 975 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 POU5F2Q8N7G0 328 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 PDZD8Q8NEN9 1154 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 OCC1Q8TAD7 63 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 DNAJB14Q8TBM8 379 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 METTL21AQ8WXB1 218 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 SEC14L1Q92503 715 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 ARHGEF2Q92974 986 aaKnown RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 CDCA5Q96FF9 252 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 CFAP53Q96M91 514 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 UPF3AQ9H1J1 476 aaKnown RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 TASP1Q9H6P5 420 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 PDE11AQ9HCR9 933 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 SLC22A11Q9NSA0 550 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 IARS2Q9NSE4 1012 aaKnown RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 LIN7CQ9NUP9 197 aaKnown RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 GIMAP4Q9NUV9 329 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 ETAA1Q9NY74 926 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 JKAMPQ9P055 326 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 GABRQQ9UN88 632 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 PTPRDP23468 1912 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 C2orf16Q68DN1 1984 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 PCNTO95613 3336 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 SCN5AQ14524 2016 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 ZC3H12DA2A288 527 aaKnown RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 C2orf78A6NCI8 922 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 LACTBL1A8MY62 500 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 GRM8O00222 908 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 BCAT2O15382 392 aaPredicted RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 TACC1O75410 805 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 RECQL4O94761 1208 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 LETM1O95202 739 aaPredicted RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 VNN1O95497 513 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 DBHP09172 617 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 GHRP10912 638 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 TNFRSF1AP19438 455 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 EEF1DP29692 281 aaKnown RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 PTPN7P35236 360 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 PLA2G5P39877 138 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 PITPNBP48739 271 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 MFAP4P55083 255 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 YPEL5P62699 121 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 MTAPQ13126 283 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 NOMO2Q5JPE7 1267 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 AKNAD1Q5T1N1 836 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 UTP14CQ5TAP6 766 aaKnown RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 DRICH1Q6PGQ1 229 aaPredicted RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 MTHFD1LQ6UB35 978 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 MOXD1Q6UVY6 613 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 ARMCX2Q7L311 632 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 TAS1R1Q7RTX1 841 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 DNAAF5Q86Y56 855 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 HJURPQ8NCD3 748 aaPredicted RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 BPIFB1Q8TDL5 484 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 PSPC1Q8WXF1 523 aaKnown RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 ARRDC3Q96B67 414 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 SLC46A1Q96NT5 459 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 LRRC37BQ96QE4 947 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 SIN3AQ96ST3 1273 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 PAAF1Q9BRP4 392 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 NUAK2Q9H093 628 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 P2RY12Q9H244 342 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 PDCL3Q9H2J4 239 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 CCDC134Q9H6E4 229 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 CRLF2Q9HC73 371 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 HSPBP1Q9NZL4 362 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 HESX1Q9UBX0 185 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 EML5Q05BV3 1969 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 MANSC4A6NHS7 340 aaPredicted RBP3.4□□□□□ -1.86
SMC6-208ENST00000481708 KIAA0391O15091 583 aaKnown RBP3.4□□□□□ -1.86
SMC6-208ENST00000481708 PGRMC2O15173 223 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 GPRIN2O60269 458 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 TPPPO94811 219 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 PRKCHP24723 683 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 HSPA4P34932 840 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 CRHR1P34998 444 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 SKIV2L2P42285 1042 aaKnown RBP3.4□□□□□ -1.86
SMC6-208ENST00000481708 RFX5P48382 616 aaPredicted RBP3.4□□□□□ -1.86
SMC6-208ENST00000481708 HNRNPKP61978 463 aaKnown RBP eCLIP3.4□□□□□ -1.86
SMC6-208ENST00000481708 EFNB1P98172 346 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 RUNX1T1Q06455 604 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 TBL3Q12788 808 aaKnown RBP3.4□□□□□ -1.86
SMC6-208ENST00000481708 PGM5Q15124 567 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 OASLQ15646 514 aaKnown RBP3.4□□□□□ -1.86
SMC6-208ENST00000481708 SLC44A4Q53GD3 710 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 CXorf66Q5JRM2 361 aaPredicted RBP3.4□□□□□ -1.86
SMC6-208ENST00000481708 CC2D1BQ5T0F9 858 aaKnown RBP3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms