RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 Q5PR19 223 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 SH2D4BQ5SQS7 431 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 GJB7Q6PEY0 223 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 BBS12Q6ZW61 710 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 MEPCEQ7L2J0 689 aaKnown RBP3.9□□□□□ -1.79
COPA-204ENST00000481522 WDR5BQ86VZ2 330 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 CPOQ8IVL8 374 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 FAM217AQ8IXS0 508 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 GHDCQ8N2G8 530 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 PELI3Q8N2H9 469 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 C7orf57Q8NEG2 295 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 CD180Q99467 661 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 ISCUQ9H1K1 167 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 TTC12Q9H892 705 aaPredicted RBP3.9□□□□□ -1.79
COPA-204ENST00000481522 SIRT3Q9NTG7 399 aaPredicted RBP3.9□□□□□ -1.79
COPA-204ENST00000481522 ZDHHC7Q9NXF8 308 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 SAGE1Q9NXZ1 904 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 FBXO40Q9UH90 709 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 ICKQ9UPZ9 632 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 RAP2CQ9Y3L5 183 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 LRRFIP2Q9Y608 721 aaKnown RBP3.9□□□□□ -1.79
COPA-204ENST00000481522 SPTAN1Q13813 2472 aaKnown RBP3.9□□□□□ -1.79
COPA-204ENST00000481522 KNDC1Q76NI1 1749 aa3.9□□□□□ -1.79
COPA-204ENST00000481522 RRN3P2A6NIE6 340 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 SH2D7A6NKC9 451 aaPredicted RBP3.89□□□□□ -1.79
COPA-204ENST00000481522 C17orf100A8MU93 164 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 SPTLC2O15270 562 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 RNMTO43148 476 aaKnown RBP3.89□□□□□ -1.79
COPA-204ENST00000481522 CYP1A2P05177 515 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 UNGP13051 313 aaPredicted RBP3.89□□□□□ -1.79
COPA-204ENST00000481522 CNTFP26441 200 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 TMPRSS3P57727 454 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 TLE2Q04725 743 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.89□□□□□ -1.79
COPA-204ENST00000481522 GPR18Q14330 331 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 HSP90AB4PQ58FF6 505 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 WDR45BQ5MNZ6 344 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 WASHC2DQ5SRD0 308 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 Q6ZTK2 550 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 GPSM1Q86YR5 675 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 FBXL14Q8N1E6 418 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 INPP5DQ92835 1189 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 THOC3Q96J01 351 aaKnown RBP3.89□□□□□ -1.79
COPA-204ENST00000481522 MARK4Q96L34 752 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 TMEM204Q9BSN7 226 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 B3GNT4Q9C0J1 378 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 ALKBH4Q9NXW9 302 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 GRHL1Q9NZI5 618 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 CDH22Q9UJ99 828 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 ABT1Q9ULW3 272 aaKnown RBP3.89□□□□□ -1.79
COPA-204ENST00000481522 INSL5Q9Y5Q6 135 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 ITSN1Q15811 1721 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 KIAA1551Q9HCM1 1747 aa3.89□□□□□ -1.79
COPA-204ENST00000481522 N4BP2Q86UW6 1770 aaPredicted RBP3.89□□□□□ -1.79
COPA-204ENST00000481522 ADGRL3Q9HAR2 1447 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 DMDP11532 3685 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 SETD2Q9BYW2 2564 aaPredicted RBP3.88□□□□□ -1.79
COPA-204ENST00000481522 NALCNQ8IZF0 1738 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 C17orf102A2RUQ5 167 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 CREB3O43889 395 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 GUCY1B2O75343 617 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 IL1AP01583 271 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 TNFSF8P32971 234 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 PGM1P36871 562 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 RFX2P48378 723 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 RASSF2P50749 326 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 CCR5P51681 352 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 VAMP2P63027 116 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 TRPC3Q13507 836 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 SYTL3Q4VX76 610 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 OTUD1Q5VV17 481 aaPredicted RBP3.88□□□□□ -1.79
COPA-204ENST00000481522 RETSATQ6NUM9 610 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 SLC16A12Q6ZSM3 486 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 ZDHHC23Q8IYP9 409 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 SETD9Q8NE22 299 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 DNAAF1Q8NEP3 725 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 GABPB2Q8TAK5 448 aaPredicted RBP3.88□□□□□ -1.79
COPA-204ENST00000481522 NOC3LQ8WTT2 800 aaKnown RBP3.88□□□□□ -1.79
COPA-204ENST00000481522 ZNF333Q96JL9 665 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 MAELQ96JY0 434 aaKnown RBP3.88□□□□□ -1.79
COPA-204ENST00000481522 GPR63Q9BZJ6 419 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 TAOK3Q9H2K8 898 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 MROH8Q9H579 483 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 CATSPERBQ9H7T0 1116 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 ENTPD7Q9NQZ7 604 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 HIF1ANQ9NWT6 349 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 TMEM160Q9NX00 188 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 HDAC6Q9UBN7 1215 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 MYO6Q9UM54 1294 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 GTF2A1LQ9UNN4 478 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 DUOX2Q9NRD8 1548 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 TTC3P53804 2025 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 SPTBN2O15020 2390 aa3.88□□□□□ -1.79
COPA-204ENST00000481522 UGGT2Q9NYU1 1516 aa3.87□□□□□ -1.79
COPA-204ENST00000481522 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
COPA-204ENST00000481522 TARSL2A2RTX5 802 aaKnown RBP3.87□□□□□ -1.79
COPA-204ENST00000481522 FAM90A7PA6NKC0 464 aa3.87□□□□□ -1.79
COPA-204ENST00000481522 FAM90A22PA8MWA6 464 aa3.87□□□□□ -1.79
COPA-204ENST00000481522 FAM90A12PA8MX19 464 aa3.87□□□□□ -1.79
COPA-204ENST00000481522 FAM90A23PA8MXZ1 464 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms