RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 ECHDC3Q96DC8 303 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 LRIG1Q96JA1 1093 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 SLC6A18Q96N87 628 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 IL12RB2Q99665 862 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 SEMA3CQ99985 751 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 CPEB1Q9BZB8 566 aaKnown RBP10.68□□□□□ -0.7
SSBP1-210ENST00000481508 PCED1AQ9H1Q7 454 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 CAAP1Q9H8G2 361 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 DYRK4Q9NR20 520 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 VPS45Q9NRW7 570 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 RBM22Q9NW64 420 aaKnown RBP eCLIP10.68□□□□□ -0.72e-10■■■■□ 23.7
SSBP1-210ENST00000481508 R3HDM2Q9Y2K5 976 aaKnown RBP10.68□□□□□ -0.7
SSBP1-210ENST00000481508 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.68□□□□□ -0.7
SSBP1-210ENST00000481508 PCDHGC4Q9Y5F7 938 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 SCN8AQ9UQD0 1980 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 ACACAQ13085 2346 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 MYLKQ15746 1914 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 TDRD6O60522 2096 aaKnown RBP10.67□□□□□ -0.7
SSBP1-210ENST00000481508 KNL1Q8NG31 2342 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 HECTD1Q9ULT8 2610 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 MYO18BQ8IUG5 2567 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 A0A1W2PQU0 124 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 LNP1A1A4G5 178 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 LRRC72A6NJI9 287 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 AREL1O15033 823 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 LATO43561 262 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 JCHAINP01591 159 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 WNT1P04628 370 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 MMP2P08253 660 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 ZNF806P0C7X5 589 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 PRLRP16471 622 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 ZFXP17010 805 aaPredicted RBP10.67□□□□□ -0.7
SSBP1-210ENST00000481508 MX2P20592 715 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 CCR5P51681 352 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 COPS2P61201 443 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 AP1S1P61966 158 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 IFI35P80217 286 aaPredicted RBP10.67□□□□□ -0.7
SSBP1-210ENST00000481508 NSUN2Q08J23 767 aaKnown RBP eCLIP10.67□□□□□ -0.7
SSBP1-210ENST00000481508 WASHC5Q12768 1159 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 HNRNPDQ14103 355 aaKnown RBP10.67□□□□□ -0.7
SSBP1-210ENST00000481508 TFDP2Q14188 446 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 PDK1Q15118 436 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 NOMO1Q15155 1222 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 ZNF284Q2VY69 593 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 TRIM61Q5EBN2 209 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 ALG1LQ6GMV1 187 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 TRIM69Q86WT6 500 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 LRRC49Q8IUZ0 686 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 ACTL9Q8TC94 416 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 PPP1R16AQ96I34 528 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 QKIQ96PU8 341 aaKnown RBP eCLIP10.67□□□□□ -0.7
SSBP1-210ENST00000481508 TUBGCP5Q96RT8 1024 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 MYOCQ99972 504 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 TLR10Q9BXR5 811 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 OSBPL1AQ9BXW6 950 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 SUV39H2Q9H5I1 410 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 CAPN10Q9HC96 672 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 PREBQ9HCU5 417 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 TM9SF3Q9HD45 589 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 FZD3Q9NPG1 666 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 PCDH12Q9NPG4 1184 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 TRMT1Q9NXH9 659 aaKnown RBP10.67□□□□□ -0.7
SSBP1-210ENST00000481508 SEPT10Q9P0V9 454 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 DKK3Q9UBP4 350 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 ATP8A1Q9Y2Q0 1164 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 TTLL3Q9Y4R7 772 aa10.67□□□□□ -0.7
SSBP1-210ENST00000481508 LRP4O75096 1905 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 A0A0U1RQS6 177 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 A0A1W2PPC4 97 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 A0A1W2PR77 199 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 MIF4GDA9UHW6 222 aaKnown RBP10.66□□□□□ -0.7
SSBP1-210ENST00000481508 UPK3BL1B0FP48 263 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 UPK3BL2E5RIL1 263 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 F5H423 210 aaPredicted RBP10.66□□□□□ -0.7
SSBP1-210ENST00000481508 APOC4-APOC2K7ER74 178 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 TAF4O00268 1085 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 PPP1R12AO14974 1030 aaPredicted RBP10.66□□□□□ -0.7
SSBP1-210ENST00000481508 RAD51BO15315 384 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 HTRA2O43464 458 aaPredicted RBP10.66□□□□□ -0.7
SSBP1-210ENST00000481508 PCDH8O95206 1070 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 APOC2P02655 101 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 CFIP05156 583 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 PDHA1P08559 390 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 PTPN3P26045 913 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 CD27P26842 260 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 CD68P34810 354 aaPredicted RBP10.66□□□□□ -0.7
SSBP1-210ENST00000481508 HSPA9P38646 679 aaKnown RBP10.66□□□□□ -0.7
SSBP1-210ENST00000481508 CSNK1EP49674 416 aaKnown RBP10.66□□□□□ -0.7
SSBP1-210ENST00000481508 RENBPP51606 427 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 SKOR1P84550 965 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 OTUD4Q01804 1114 aaKnown RBP10.66□□□□□ -0.7
SSBP1-210ENST00000481508 RAD51Q06609 339 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 BCL2L1Q07817 233 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 RALGDSQ12967 914 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 KLF1Q13351 362 aaPredicted RBP10.66□□□□□ -0.7
SSBP1-210ENST00000481508 TMEM259Q4ZIN3 620 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 WDR45BQ5MNZ6 344 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 TTC7BQ86TV6 843 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 HORMAD1Q86X24 394 aa10.66□□□□□ -0.7
SSBP1-210ENST00000481508 UBL4BQ8N7F7 174 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms