RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 TRABD2BA6NFA1 517 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 J3KR12 359 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 K7ESM1 405 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 TRIM38O00635 465 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 MMP20O60882 483 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 NEBLO76041 1014 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 RASGRP1O95267 797 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 PIGNO95427 931 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 CAPNS1P04632 268 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 GYPCP04921 128 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 HOXC4P09017 264 aaPredicted RBP11.53□□□□□ -0.56
CCM2-213ENST00000480658 CYP2A6P11509 494 aaPredicted RBP11.53□□□□□ -0.56
CCM2-213ENST00000480658 SKILP12757 684 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 TIMP2P16035 220 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 MX2P20592 715 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 GKP32189 559 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 MAN1A1P33908 653 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 ACTN2P35609 894 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 EIF4A3P38919 411 aaKnown RBP11.53□□□□□ -0.56
CCM2-213ENST00000480658 SCNN1BP51168 640 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 CAMK2BQ13554 666 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 FGL2Q14314 439 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 NFATC4Q14934 902 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 NR0B2Q15466 257 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 SLC18A3Q16572 532 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 CCDC122Q5T0U0 273 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 C6orf132Q5T0Z8 1188 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 MARC1Q5VT66 337 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 E4F1Q66K89 784 aaPredicted RBP11.53□□□□□ -0.56
CCM2-213ENST00000480658 LRRC69Q6ZNQ3 347 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 USP45Q70EL2 814 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 DPPA4Q7L190 304 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 VSIG1Q86XK7 387 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 ARHGAP12Q8IWW6 846 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 PHACTR4Q8IZ21 702 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 ARFGAP1Q8N6T3 406 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 TP53I13Q8NBR0 393 aaPredicted RBP11.53□□□□□ -0.56
CCM2-213ENST00000480658 TSEN2Q8NCE0 465 aaKnown RBP11.53□□□□□ -0.56
CCM2-213ENST00000480658 ZNF564Q8TBZ8 553 aaPredicted RBP11.53□□□□□ -0.56
CCM2-213ENST00000480658 FATE1Q969F0 183 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 APOLD1Q96LR9 279 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 CSPG4P5Q96PW8 444 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 NUDCD1Q96RS6 583 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 MGME1Q9BQP7 344 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 WRAP53Q9BUR4 548 aaKnown RBP11.53□□□□□ -0.56
CCM2-213ENST00000480658 GPATCH2LQ9NWQ4 482 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 ITM2BQ9Y287 266 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 AK5Q9Y6K8 562 aa11.53□□□□□ -0.56
CCM2-213ENST00000480658 A0A087WV48 116 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 ZNF487B1APH4 448 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 TMX2-CTNND1H3BSU7 103 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 TNFRSF10CO14798 259 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 RAD51BO15315 384 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 SPINT1O43278 529 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 CTSEP14091 401 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 IGFALSP35858 605 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 MLLT3P42568 568 aaPredicted RBP11.52□□□□□ -0.57
CCM2-213ENST00000480658 SSR1P43307 286 aaKnown RBP11.52□□□□□ -0.57
CCM2-213ENST00000480658 MMP13P45452 471 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 LIG3P49916 1009 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 HK3P52790 923 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 KIAA1024LP59773 190 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 INSM1Q01101 510 aaPredicted RBP11.52□□□□□ -0.57
CCM2-213ENST00000480658 SLC25A11Q02978 314 aaKnown RBP11.52□□□□□ -0.57
CCM2-213ENST00000480658 TARDBPQ13148 414 aaKnown RBP eCLIP11.52□□□□□ -0.57
CCM2-213ENST00000480658 IRF4Q15306 451 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 CA9Q16790 459 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 SMTNL2Q2TAL5 461 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 ODF2Q5BJF6 829 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 PRRT3Q5FWE3 981 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 FAXCQ5TGI0 409 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 CYP4V2Q6ZWL3 525 aaPredicted RBP11.52□□□□□ -0.57
CCM2-213ENST00000480658 CNGA4Q8IV77 575 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 RHOT2Q8IXI1 618 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 NPWQ8N729 165 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 ARL10Q8N8L6 244 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 OR8K1Q8NGG5 319 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 IFI44Q8TCB0 444 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 MAPK15Q8TD08 544 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 LMX1AQ8TE12 382 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 WDR92Q96MX6 357 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 BOCQ9BWV1 1114 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 MAGEB5Q9BZ81 275 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 POLR1EQ9GZS1 481 aaKnown RBP11.52□□□□□ -0.57
CCM2-213ENST00000480658 KLC2Q9H0B6 622 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 IFNKQ9P0W0 207 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 CTTNBP2NLQ9P2B4 639 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 KLQ9UEF7 1012 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 GGT7Q9UJ14 662 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 PHTF1Q9UMS5 762 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 DGKBQ9Y6T7 804 aa11.52□□□□□ -0.57
CCM2-213ENST00000480658 PTPRBP23467 1997 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 A0A087X0T9 212 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 EME2A4GXA9 379 aaPredicted RBP11.51□□□□□ -0.57
CCM2-213ENST00000480658 RNF103O00237 685 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 AKR1B10O60218 316 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 OPA1O60313 960 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 MT-CO3P00414 261 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 FAM228BP0C875 321 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 RARAP10276 462 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms