RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 RSPH14Q9UHP6 348 aa19.87■□□□□ 0.77
LIME1-205ENST00000480139 PILRBQ9UKJ0 227 aa19.87■□□□□ 0.77
LIME1-205ENST00000480139 SAR1BQ9Y6B6 198 aa19.87■□□□□ 0.77
LIME1-205ENST00000480139 OTOGLQ3ZCN5 2332 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 NEMP1O14524 444 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 FANCGO15287 622 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 LRP3O75074 770 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 PCDH8O95206 1070 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 ITPKAP23677 461 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 CD27P26842 260 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 NYAP1Q6ZVC0 841 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 RABEPKQ7Z6M1 372 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 NDUFAF2Q8N183 169 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 PRELID2Q8N945 189 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 FAM71DQ8N9W8 422 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 ASB12Q8WXK4 309 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 MS4A14Q96JA4 679 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 MCCC1Q96RQ3 725 aaPredicted RBP19.86■□□□□ 0.77
LIME1-205ENST00000480139 TRIB3Q96RU7 358 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 ORAI3Q9BRQ5 295 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 PCDH9Q9HC56 1237 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 SUSD2Q9UGT4 822 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 FAM153AQ9UHL3 310 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 ZNF148Q9UQR1 794 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 DMTF1Q9Y222 760 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 ITM2BQ9Y287 266 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 DRG1Q9Y295 367 aaKnown RBP19.86■□□□□ 0.77
LIME1-205ENST00000480139 PLXNA2O75051 1894 aa19.86■□□□□ 0.77
LIME1-205ENST00000480139 GPR179Q6PRD1 2367 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 A0A1W2PPC4 97 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 A0A1W2PQU0 124 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 PRLP01236 227 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 PDHA1P08559 390 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 GRIA4P48058 902 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 GDF10P55107 478 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 CREB5Q02930 508 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 MPP3Q13368 585 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 ZNF284Q2VY69 593 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 P3H1Q32P28 736 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 SETMARQ53H47 684 aaPredicted RBP19.85■□□□□ 0.77
LIME1-205ENST00000480139 LRRC73Q5JTD7 316 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 PLA2G2CQ5R387 149 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 DPPA4Q7L190 304 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 C12orf50Q8NA57 414 aaPredicted RBP19.85■□□□□ 0.77
LIME1-205ENST00000480139 SPATA22Q8NHS9 363 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 C1orf216Q8TAB5 229 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 CCDC110Q8TBZ0 833 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 RUBCNQ92622 972 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 SCRN2Q96FV2 425 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 ADGRE3Q9BY15 652 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 NCDNQ9UBB6 729 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 GGT7Q9UJ14 662 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 ZFR2Q9UPR6 939 aaKnown RBP19.85■□□□□ 0.77
LIME1-205ENST00000480139 CHKBQ9Y259 395 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 TRPM6Q9BX84 2022 aa19.85■□□□□ 0.77
LIME1-205ENST00000480139 A0A0J9YYE9 177 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 ZNF185O15231 689 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 ANXA9O76027 345 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 MT-CYBP00156 380 aaPredicted RBP19.84■□□□□ 0.77
LIME1-205ENST00000480139 EPOP01588 193 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 TRBC1P01850 177 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 MPLP40238 635 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 CDK18Q07002 472 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 SNX1Q13596 522 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 CYP1B1Q16678 543 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 FAM182AQ5T1J6 154 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 KDELC1Q6UW63 502 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 USP45Q70EL2 814 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 ASCL5Q7RTU5 278 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 KLHDC8BQ8IXV7 354 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 RGL4Q8IZJ4 473 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 CEP76Q8TAP6 659 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 CXorf40AQ8TE69 158 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 OXNAD1Q96HP4 312 aaPredicted RBP19.84■□□□□ 0.77
LIME1-205ENST00000480139 C1QTNF2Q9BXJ5 285 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 ARRDC1-AS1Q9H2J1 176 aa19.84■□□□□ 0.77
LIME1-205ENST00000480139 EIF2B4Q9UI10 523 aaKnown RBP19.84■□□□□ 0.77
LIME1-205ENST00000480139 AAR2Q9Y312 384 aaKnown RBP19.84■□□□□ 0.77
LIME1-205ENST00000480139 LRRK1Q38SD2 2015 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 CYP2A6P11509 494 aaPredicted RBP19.83■□□□□ 0.77
LIME1-205ENST00000480139 GNSP15586 552 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 ITIH2P19823 946 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 EPHB1P54762 984 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 GEMP55040 296 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 FAM193AP78312 1265 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 RALGDSQ12967 914 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 PRPSAP1Q14558 356 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 PARP6Q2NL67 630 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 SEL1L3Q68CR1 1132 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 ARHGEF18Q6ZSZ5 1173 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 SNX19Q92543 992 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 PIGKQ92643 395 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 LYSMD1Q96S90 227 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 GORASP1Q9BQQ3 440 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 EBF2Q9HAK2 575 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 TMEM74BQ9NUR3 256 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 RNF14Q9UBS8 474 aa19.83■□□□□ 0.77
LIME1-205ENST00000480139 SDK1Q7Z5N4 2213 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 GOLGA6L10A0A0M3HER8 536 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 LOC285095A0A1B0GVY8 99 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms