RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 CCDC112Q8NEF3 446 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 FAM46DQ8NEK8 389 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 CASKIN2Q8WXE0 1202 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 JPH3Q8WXH2 748 aaPredicted RBP16.23■□□□□ 0.19
DDX56-210ENST00000479440 VOPP1Q96AW1 172 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 TTYH3Q9C0H2 523 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 SEMA6CQ9H3T2 930 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 PLCB1Q9NQ66 1216 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 TMEM248Q9NWD8 314 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 DNAI1Q9UI46 699 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 MAN2B2Q9Y2E5 1009 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 DOCK4Q8N1I0 1966 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 ZNF891A8MT65 544 aaPredicted RBP16.22■□□□□ 0.19
DDX56-210ENST00000479440 CACNB4O00305 520 aaPredicted RBP16.22■□□□□ 0.19
DDX56-210ENST00000479440 TIMP2P16035 220 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 KELP23276 732 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 FLT3P36888 993 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 GABRB2P47870 512 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 KIAA1024LP59773 190 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 PAK1Q13153 545 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 EFHC2Q5JST6 749 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 CFAP58Q5T655 872 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 SPECC1LQ69YQ0 1117 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 LEKR1Q6ZMV7 388 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 TMPRSS9Q7Z410 1059 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 BNIPLQ7Z465 357 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 NLRP14Q86W24 1093 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 ZNF354CQ86Y25 554 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 IRF2BP1Q8IU81 584 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 OR56A4Q8NGH8 313 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 C9orf43Q8TAL5 461 aaPredicted RBP16.22■□□□□ 0.19
DDX56-210ENST00000479440 C18orf8Q96DM3 657 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 CFAP57Q96MR6 1250 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 TIGD1Q96MW7 591 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 TAAR9Q96RI9 348 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 CDH19Q9H159 772 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 DPEP2Q9H4A9 486 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 NDFIP2Q9NV92 336 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 MFHAS1Q9Y4C4 1052 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 PCDHGA3Q9Y5H0 932 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 DOPEY2Q9Y3R5 2298 aa16.22■□□□□ 0.19
DDX56-210ENST00000479440 AHCTF1Q8WYP5 2266 aa16.21■□□□□ 0.19
DDX56-210ENST00000479440 BUB1O43683 1085 aa16.21■□□□□ 0.19
DDX56-210ENST00000479440 SLC9A1P19634 815 aa16.21■□□□□ 0.19
DDX56-210ENST00000479440 ITIH2P19823 946 aa16.21■□□□□ 0.19
DDX56-210ENST00000479440 GRM3Q14832 879 aa16.21■□□□□ 0.19
DDX56-210ENST00000479440 NCAPHQ15003 741 aa16.21■□□□□ 0.19
DDX56-210ENST00000479440 AGERQ15109 404 aa16.21■□□□□ 0.19
DDX56-210ENST00000479440 EXOC3L4Q17RC7 722 aa16.21■□□□□ 0.19
DDX56-210ENST00000479440 MANEALQ5VSG8 457 aa16.21■□□□□ 0.19
DDX56-210ENST00000479440 SLC47A2Q86VL8 602 aa16.21■□□□□ 0.19
DDX56-210ENST00000479440 XYLT1Q86Y38 959 aa16.21■□□□□ 0.19
DDX56-210ENST00000479440 HCAR2Q8TDS4 363 aa16.21■□□□□ 0.19
DDX56-210ENST00000479440 NKD1Q969G9 470 aa16.21■□□□□ 0.19
DDX56-210ENST00000479440 TBC1D31Q96DN5 1066 aa16.21■□□□□ 0.19
DDX56-210ENST00000479440 RDH14Q9HBH5 336 aa16.21■□□□□ 0.19
DDX56-210ENST00000479440 OR12D3Q9UGF7 316 aa16.21■□□□□ 0.19
DDX56-210ENST00000479440 PPP1R3GB7ZBB8 358 aa16.2■□□□□ 0.18
DDX56-210ENST00000479440 GOLGA8SH3BPF8 625 aa16.2■□□□□ 0.18
DDX56-210ENST00000479440 KDELR3O43731 214 aa16.2■□□□□ 0.18
DDX56-210ENST00000479440 CCL4P13236 92 aa16.2■□□□□ 0.18
DDX56-210ENST00000479440 LIFP15018 202 aa16.2■□□□□ 0.18
DDX56-210ENST00000479440 CDH5P33151 784 aaPredicted RBP16.2■□□□□ 0.18
DDX56-210ENST00000479440 STX17P56962 302 aa16.2■□□□□ 0.18
DDX56-210ENST00000479440 BPIFB4P59827 614 aa16.2■□□□□ 0.18
DDX56-210ENST00000479440 TRA2AQ13595 282 aaKnown RBP eCLIP16.2■□□□□ 0.18
DDX56-210ENST00000479440 IGFBP7Q16270 282 aa16.2■□□□□ 0.18
DDX56-210ENST00000479440 TSR1Q2NL82 804 aaKnown RBP16.2■□□□□ 0.18
DDX56-210ENST00000479440 OR1E3Q8WZA6 343 aa16.2■□□□□ 0.18
DDX56-210ENST00000479440 HMCESQ96FZ2 354 aa16.2■□□□□ 0.18
DDX56-210ENST00000479440 DDA1Q9BW61 102 aa16.2■□□□□ 0.18
DDX56-210ENST00000479440 FGF22Q9HCT0 170 aa16.2■□□□□ 0.18
DDX56-210ENST00000479440 PCDH12Q9NPG4 1184 aa16.2■□□□□ 0.18
DDX56-210ENST00000479440 COL12A1Q99715 3063 aa16.2■□□□□ 0.18
DDX56-210ENST00000479440 TLN1Q9Y490 2541 aaKnown RBP16.2■□□□□ 0.18
DDX56-210ENST00000479440 CHD5Q8TDI0 1954 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 TSPAN11A1L157 253 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 GTPBP10A4D1E9 387 aaKnown RBP16.19■□□□□ 0.18
DDX56-210ENST00000479440 RHPN2P1A8MT19 583 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 TNFRSF10CO14798 259 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 CAPN5O15484 640 aaPredicted RBP16.19■□□□□ 0.18
DDX56-210ENST00000479440 PIGNO95427 931 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 MMP12P39900 470 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 LIG3P49916 1009 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 ATP11AP98196 1134 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 B4GALNT1Q00973 533 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 APBA1Q02410 837 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 UGP2Q16851 508 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 AMZ1Q400G9 498 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 C4orf17Q53FE4 359 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 INO80DQ53TQ3 878 aaPredicted RBP16.19■□□□□ 0.18
DDX56-210ENST00000479440 TRNP1Q6NT89 227 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 NYAP1Q6ZVC0 841 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 ARCQ7LC44 396 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 DNAAF5Q86Y56 855 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 CACNA2D3Q8IZS8 1091 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 RCBTB1Q8NDN9 531 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 CCDC74BQ96LY2 380 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 NEU3Q9UQ49 428 aa16.19■□□□□ 0.18
DDX56-210ENST00000479440 DAAM1Q9Y4D1 1078 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms