RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TOPAZ1Q8N9V7 1692 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 C17orf113A0A1B0GUU1 675 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 CLEC3BP05452 202 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 URODP06132 367 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 PGGT1BP53609 377 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 ZBTB16Q05516 673 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 SLC18A3Q16572 532 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 AP5B1Q2VPB7 878 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 PLK5Q496M5 336 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 KIAA1755Q5JYT7 1200 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 SPATA1Q5VX52 437 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 C17orf99Q6UX52 265 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 Q6ZTC4 211 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 BRINP3Q76B58 766 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 DIS3L2Q8IYB7 885 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 FBXL14Q8N1E6 418 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 SCAIQ8N9R8 606 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 ANKRD52Q8NB46 1076 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 CHCHD6Q9BRQ6 235 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 FRMD8Q9BZ67 464 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 RBM38Q9H0Z9 239 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 TTYH1Q9H313 450 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 VEZTQ9HBM0 779 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 THSD1Q9NS62 852 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 KCND2Q9NZV8 630 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 FBXO40Q9UH90 709 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 SARDHQ9UL12 918 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 TNFSF13BQ9Y275 285 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 NRXN1Q9ULB1 1477 aa4.3□□□□□ -1.72
CDC42BPA-212ENST00000478573 SETD5Q9C0A6 1442 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 CRYBG1Q9Y4K1 1723 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 CKAP5Q14008 2032 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 A0A1W2PQM1 296 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 PRSS47A8MTI9 375 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 H0YGN5 161 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 STRNO43815 780 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 RNASEH2AO75792 299 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 SCGB1D1O95968 90 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 LDHCP07864 332 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 UBL4AP11441 157 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 COX7A2P14406 83 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 HOXB2P14652 356 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 TBXAS1P24557 533 aaPredicted RBP4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 GAD2Q05329 585 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 TDGQ13569 410 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 IDI1Q13907 227 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 KRT32Q14532 448 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 ASIC2Q16515 512 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 RPE65Q16518 533 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 SMTNL2Q2TAL5 461 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 HAUS3Q68CZ6 603 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 CFAP161Q6P656 301 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 NME8Q8N427 588 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 METTL6Q8TCB7 284 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 USP44Q9H0E7 712 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 SLC25A18Q9H1K4 315 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 PDCL3Q9H2J4 239 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 PLEKHA5Q9HAU0 1116 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 MPP6Q9NZW5 540 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 AGO2Q9UKV8 859 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 DLC1Q96QB1 1528 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 CCDC144AA2RUR9 1427 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 TECPR2O15040 1411 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 SPATA31E1Q6ZUB1 1445 aa4.29□□□□□ -1.72
CDC42BPA-212ENST00000478573 TRPM1Q7Z4N2 1603 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 ANKRD18BA2A2Z9 1011 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 PI4KAP2A4QPH2 592 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 OR6C68A6NDL8 312 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 PRPF4O43172 522 aaKnown RBP eCLIP4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 ZBED4O75132 1171 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 HSPA1AP0DMV8 641 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 HSPA1BP0DMV9 641 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 FCGR2AP12318 317 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 TNFRSF8P28908 595 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 HOXA11P31270 313 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 ABCD1P33897 745 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 POLD2P49005 469 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 BLKP51451 505 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 NAP1L1P55209 391 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 UFM1P61960 85 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 EFNB1P98172 346 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 PRKG2Q13237 762 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 C5orf22Q49AR2 442 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 ARL13AQ5H913 290 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 ZNF667Q5HYK9 610 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 FAM171A1Q5VUB5 890 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 ATF7IPQ6VMQ6 1270 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 CPXM2Q8N436 756 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 NGEFQ8N5V2 710 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 ARL14EPQ8N8R7 260 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 HDAC7Q8WUI4 952 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 IP6K1Q92551 441 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 HSPH1Q92598 858 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 LPAR1Q92633 364 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 EME1Q96AY2 570 aa4.28□□□□□ -1.72
CDC42BPA-212ENST00000478573 CLMNQ96JQ2 1002 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms