RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 CCR9P51686 369 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 FOXG1P55316 489 aaPredicted RBP4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 DDX10Q13206 875 aaKnown RBP4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 FHL1Q13642 323 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 CTTNQ14247 550 aaKnown RBP4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 SHBQ15464 509 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 GSTA3Q16772 222 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 TCTN1Q2MV58 587 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 TDRD12Q587J7 1177 aaKnown RBP4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 LRCH2Q5VUJ6 765 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 LRRC8EQ6NSJ5 796 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 TDRPQ86YL5 185 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 DHX40Q8IX18 779 aaKnown RBP4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 CADM4Q8NFZ8 388 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 METTL6Q8TCB7 284 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 TRIB2Q92519 343 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 MIB2Q96AX9 1013 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 FBXL8Q96CD0 374 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 TMEM204Q9BSN7 226 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 WACQ9BTA9 647 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 PRKRIP1Q9H875 184 aaPredicted RBP4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 CLK4Q9HAZ1 481 aaKnown RBP4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 BPIFA1Q9NP55 256 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 PCDHB16Q9NRJ7 776 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 OR6C3Q9NZP0 311 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 EVPLQ92817 2033 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 KDM3AQ9Y4C1 1321 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 LRRC53A6NM62 1247 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 B4E171 279 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 NPIPB11E5RHQ5 1161 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 TAF4O00268 1085 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 LDLRAD4O15165 306 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 KLK8O60259 260 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 PRSS2P07478 247 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 CD58P19256 250 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 CHATP28329 748 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 RPL3P39023 403 aaKnown RBP4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 TSPAN7P41732 249 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 AMTP48728 403 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 EGR4Q05215 589 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 CRYZQ08257 329 aaKnown RBP4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 TRAF2Q12933 501 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 GRIK3Q13003 919 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 TYW3Q6IPR3 259 aaKnown RBP4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 KLHL24Q6TFL4 600 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 DIS3L2Q8IYB7 885 aaKnown RBP4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 SAMD14Q8IZD0 417 aaPredicted RBP4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 CNTROBQ8N137 903 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 IQCF1Q8N6M8 205 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 B4GALNT2Q8NHY0 566 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 ADAMTS14Q8WXS8 1223 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 TXNDC15Q96J42 360 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 LYZL4Q96KX0 146 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 USP44Q9H0E7 712 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 BRF2Q9HAW0 419 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 MAGEE1Q9HCI5 957 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 WNT16Q9UBV4 365 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 SLC45A1Q9Y2W3 748 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 NFE2L3Q9Y4A8 694 aa4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 LSM4Q9Y4Z0 139 aaKnown RBP4.05□□□□□ -1.76
SMARCA1-204ENST00000478420 USP17L23D6RBM5 183 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 SEC14L5O43304 696 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 TIMM44O43615 452 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 SERPINI2O75830 405 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 SEC14L2O76054 403 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 TMEM63AO94886 807 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 VNN2O95498 520 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 TBX18O95935 607 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 GLUD1P00367 558 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 CD4P01730 458 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 HOXB5P09067 269 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 HSPA1AP0DMV8 641 aaKnown RBP4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 HSPA1BP0DMV9 641 aaKnown RBP4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 AGAP20933 346 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 GPTP24298 496 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 C21orf33P30042 268 aaPredicted RBP4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 GLUD2P49448 558 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 MXI1P50539 228 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 RARSP54136 660 aaKnown RBP4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 NEDD9Q14511 834 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 KCTD2Q14681 263 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 TSTQ16762 297 aaKnown RBP4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 EFHC1Q5JVL4 640 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 FAAH2Q6GMR7 532 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 CDC73Q6P1J9 531 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 C8orf82Q6P1X6 216 aaPredicted RBP4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 DSTYKQ6XUX3 929 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 FAM43BQ6ZT52 329 aaPredicted RBP4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 NEK10Q6ZWH5 1172 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 RSRC2Q7L4I2 434 aaKnown RBP4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 SHFQ7M4L6 423 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 NOXA1Q86UR1 476 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 GLCCI1Q86VQ1 547 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 FJX1Q86VR8 437 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 ZDHHC17Q8IUH5 632 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 CNPY4Q8N129 248 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 AADATQ8N5Z0 425 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 PDILTQ8N807 584 aa4.04□□□□□ -1.76
SMARCA1-204ENST00000478420 SCCPDHQ8NBX0 429 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms