RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ZRANB3Q5FWF4 1079 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 JMJD6Q6NYC1 403 aaPredicted RBP7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 SPNS3Q6ZMD2 512 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 SETD3Q86TU7 594 aaPredicted RBP7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 FAM129CQ86XR2 697 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 UBR7Q8N806 425 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 IQUBQ8NA54 791 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 KIAA0895Q8NCT3 520 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 FBXL13Q8NEE6 735 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 OR1E3Q8WZA6 343 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 DHX58Q96C10 678 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 C19orf60Q96EN9 201 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 C1QTNF7Q9BXJ2 289 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 SLC4A5Q9BY07 1137 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 SLC29A3Q9BZD2 475 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 TMEM168Q9H0V1 697 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 MMRN2Q9H8L6 949 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 MRPL40Q9NQ50 206 aaKnown RBP7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 FBXO8Q9NRD0 319 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 SPATS2LQ9NUQ6 558 aaKnown RBP7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 TMEM9Q9P0T7 183 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 HECAQ9UBI9 543 aaPredicted RBP7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 KCND3Q9UK17 655 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 TRAF3IP3Q9Y228 551 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 OR1A2Q9Y585 309 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 HS3ST4Q9Y661 456 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 RPS6KL1Q9Y6S9 549 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 SHANK1Q9Y566 2161 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 CCDC168Q8NDH2 2452 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 IGHV1OR21-1A0A087WYE8 117 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 TMEM202A6NGA9 273 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 PPM1DO15297 605 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 ZW10O43264 779 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 SART1O43290 800 aaKnown RBP7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 FGF1P05230 155 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 RHOCP08134 193 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 HOXB4P17483 251 aaPredicted RBP7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 GGCXP38435 758 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 SERPINH1P50454 418 aaKnown RBP7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 PGDP52209 483 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 YWHAZP63104 245 aaKnown RBP7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 CUL2Q13617 745 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 CUL4BQ13620 913 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 NR6A1Q15406 480 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 ARTNQ5T4W7 220 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 RETSATQ6NUM9 610 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 FAM173BQ6P4H8 233 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 TMEM71Q6P5X7 295 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 CEACAM20Q6UY09 585 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 ARHGAP22Q7Z5H3 698 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 TTC7BQ86TV6 843 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 ZNF683Q8IZ20 524 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 ESX1Q8N693 406 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 ATL2Q8NHH9 583 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 FUBP1Q96AE4 644 aaKnown RBP7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 TMX3Q96JJ7 454 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 LURAP1Q96LR2 239 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 WDR92Q96MX6 357 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 RANBP9Q96S59 729 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 DPYSL5Q9BPU6 564 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 TRIM62Q9BVG3 475 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 ZDHHC6Q9H6R6 413 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 POPDC2Q9HBU9 364 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 FGF22Q9HCT0 170 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 APMAPQ9HDC9 416 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 ITGB1BP2Q9UKP3 347 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 FCF1Q9Y324 198 aaKnown RBP7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 PCDHGA9Q9Y5G4 932 aaKnown RBP7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 ACTL7AQ9Y615 435 aa7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 NIPBLQ6KC79 2804 aaeCLIP7.38□□□□□ -1.23
SPTLC1-205ENST00000477888 HEATR9A2RTY3 570 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 CDC14CA4D256 554 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 DRGXA6NNA5 263 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 POM121CA8CG34 1229 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 M0QYV0 167 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 RNF225M0QZC1 329 aaPredicted RBP7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 TNFRSF10CO14798 259 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 KRT86O43790 486 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 KLRC4O43908 158 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 DIAPH2O60879 1101 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 PAGE1O75459 146 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 CREG1O75629 220 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 MAP3K6O95382 1288 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 ECEL1O95672 775 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 UGT2B4P06133 528 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 PAEPP09466 180 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 KRT13P13646 458 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 MAN1A1P33908 653 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 DLSTP36957 453 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 GPD2P43304 727 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 ARF5P84085 180 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 AGERQ15109 404 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 TAF5Q15542 800 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 NFIL3Q16649 462 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 TSR1Q2NL82 804 aaKnown RBP7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 TMEM52BQ4KMG9 183 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 LRRC73Q5JTD7 316 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 NRROSQ86YC3 692 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 OR7D4Q8NG98 312 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 OR56A4Q8NGH8 313 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms