RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 PRKAR1BP31321 381 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 IL13P35225 146 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 SMCPP49901 116 aaPredicted RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ZNF135P52742 658 aaPredicted RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 NAGLUP54802 743 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 RTP1P59025 263 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 EFNB1P98172 346 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 PRKCZQ05513 592 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 SLFN5Q08AF3 891 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ABHD18Q0P651 414 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 CHIT1Q13231 466 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 PPIGQ13427 754 aaKnown RBP eCLIP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 GPM6BQ13491 265 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 FRG1Q14331 258 aaKnown RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 STILQ15468 1287 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 TXNRD1Q16881 649 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 IGSF11Q5DX21 431 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 FAM47AQ5JRC9 791 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 C6orf136Q5SQH8 315 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 CDKAL1Q5VV42 579 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 TAF3Q5VWG9 929 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ATG9BQ674R7 924 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 HIST2H2BCQ6DN03 193 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 HIST2H2BDQ6DRA6 164 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 MSANTD2Q6P1R3 559 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 OGFOD3Q6PK18 319 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 PAOXQ6QHF9 649 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ZPBP2Q6X784 338 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 PRR23CQ6ZRP0 262 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 PIK3AP1Q6ZUJ8 805 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 C11orf57Q6ZUT1 292 aaPredicted RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 MED25Q71SY5 747 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 KCTD9Q7L273 389 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ZNF551Q7Z340 670 aaPredicted RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ZNF572Q7Z3I7 529 aaPredicted RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 SLC46A3Q7Z3Q1 461 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 HAUS6Q7Z4H7 955 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 CAMKMTQ7Z624 323 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 PRRT2Q7Z6L0 340 aaPredicted RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 TLK2Q86UE8 772 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 SLCO6A1Q86UG4 719 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 FAM83AQ86UY5 434 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 EXOC3L1Q86VI1 746 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 TAX1BP1Q86VP1 789 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 CDH26Q8IXH8 852 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ELMOD2Q8IZ81 293 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 MB21D1Q8N884 522 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 FAM46DQ8NEK8 389 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 SUPT20HQ8NEM7 779 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 CADM4Q8NFZ8 388 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ST7LQ8TDW4 575 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 FBLIM1Q8WUP2 373 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 CNOT9Q92600 299 aaKnown RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 UBE2FQ969M7 185 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 PPP2R3CQ969Q6 453 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ARRDC3Q96B67 414 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 TMEM186Q96B77 213 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 DTNBP1Q96EV8 351 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 FAM163AQ96GL9 167 aaPredicted RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 PEX11GQ96HA9 241 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 FAR2Q96K12 515 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 WDFY2Q96P53 400 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 HIST1H2AAQ96QV6 131 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 JMJD8Q96S16 334 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 GAD1Q99259 594 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 NAP1L3Q99457 506 aaPredicted RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 GPR20Q99678 358 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ERP44Q9BS26 406 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 MECRQ9BV79 373 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 TPPP3Q9BW30 176 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 NFKBIZQ9BYH8 718 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 NACAP1Q9BZK3 213 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 MTMR12Q9C0I1 747 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 EPC1Q9H2F5 836 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 TTYH1Q9H313 450 aaPredicted RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 HRH4Q9H3N8 390 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 TFB2MQ9H5Q4 396 aaKnown RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ZNF552Q9H707 407 aaPredicted RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 COQ10BQ9H8M1 238 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 AKIRIN1Q9H9L7 192 aaPredicted RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 SYTL2Q9HCH5 934 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 TUFT1Q9NNX1 390 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 SLC39A2Q9NP94 309 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 PPANQ9NQ55 473 aaKnown RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 C1GALT1Q9NS00 363 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 CENPMQ9NSP4 180 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 EXOC1Q9NV70 894 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 FBXO28Q9NVF7 368 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 TMOD3Q9NYL9 352 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 WSB2Q9NYS7 404 aaPredicted RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 NCKIPSDQ9NZQ3 722 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 LMCD1Q9NZU5 365 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ANKMY1Q9P2S6 941 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 HAO1Q9UJM8 370 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 TLK1Q9UKI8 766 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 PSME2Q9UL46 239 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 PADI1Q9ULC6 663 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 SLC8A2Q9UPR5 921 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 EXO1Q9UQ84 846 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms