RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 RMI1Q9H9A7 625 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 TLR9Q9NR96 1032 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 THAP1Q9NVV9 213 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 GOLGA4Q13439 2230 aaKnown RBP13.48□□□□□ -0.25
HDAC7-221ENST00000477203 MAGEB16A2A368 324 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 TMEM233B4DJY2 109 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 TIMM44O43615 452 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 ENTPD5O75356 428 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 RHOCP08134 193 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 PAX3P23760 479 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 GKP32189 559 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 ARCN1P48444 511 aaKnown RBP13.48□□□□□ -0.25
HDAC7-221ENST00000477203 TUFMP49411 452 aaKnown RBP13.48□□□□□ -0.25
HDAC7-221ENST00000477203 NDST2P52849 883 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 LRRC26Q2I0M4 334 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 AFMIDQ63HM1 303 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 FSTL5Q8N475 847 aaPredicted RBP13.48□□□□□ -0.25
HDAC7-221ENST00000477203 ARRDC2Q8TBH0 407 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 VWCEQ96DN2 955 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 ZNF558Q96NG5 402 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 PACSIN3Q9UKS6 424 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 OGDHLQ9ULD0 1010 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 COL6A1P12109 1028 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 RAG1P15918 1043 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 STMN1P16949 149 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 MZF1P28698 734 aaPredicted RBP13.48□□□□□ -0.25
HDAC7-221ENST00000477203 MNX1P50219 401 aaPredicted RBP13.48□□□□□ -0.25
HDAC7-221ENST00000477203 ATXN7L2Q5T6C5 722 aaPredicted RBP13.48□□□□□ -0.25
HDAC7-221ENST00000477203 TEX9Q8N6V9 391 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 TTC8Q8TAM2 541 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 SHKBP1Q8TBC3 707 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 OLFM1Q99784 485 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 MIPEPQ99797 713 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 RHOJQ9H4E5 214 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 ZNF334Q9HCZ1 680 aaPredicted RBP13.48□□□□□ -0.25
HDAC7-221ENST00000477203 AGO1Q9UL18 857 aaKnown RBP13.48□□□□□ -0.25
HDAC7-221ENST00000477203 BLOC1S6Q9UL45 172 aa13.48□□□□□ -0.25
HDAC7-221ENST00000477203 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.47□□□□□ -0.25
HDAC7-221ENST00000477203 B2RBV5 119 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 H0Y626 953 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 K7ERQ8 282 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 NRG2O14511 850 aaPredicted RBP13.47□□□□□ -0.25
HDAC7-221ENST00000477203 GYG2O15488 501 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 PFDN1O60925 122 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 URODP06132 367 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 CKMP06732 381 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 ZCCHC18P0CG32 403 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 HNRNPLP14866 589 aaKnown RBP eCLIP13.47□□□□□ -0.253e-6■■■■□ 20
HDAC7-221ENST00000477203 OXCT1P55809 520 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 ZXDBP98169 803 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 ZNF177Q13360 481 aaPredicted RBP13.47□□□□□ -0.25
HDAC7-221ENST00000477203 CCDC6Q16204 474 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 SLC8B1Q6J4K2 584 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 CYS1Q717R9 158 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 WDR75Q8IWA0 830 aaKnown RBP13.47□□□□□ -0.25
HDAC7-221ENST00000477203 TRIM42Q8IWZ5 723 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 HS6ST3Q8IZP7 471 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 LPCAT1Q8NF37 534 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 PIWIL2Q8TC59 973 aaKnown RBP13.47□□□□□ -0.25
HDAC7-221ENST00000477203 CINPQ9BW66 212 aaPredicted RBP13.47□□□□□ -0.25
HDAC7-221ENST00000477203 GATA5Q9BWX5 397 aaPredicted RBP13.47□□□□□ -0.25
HDAC7-221ENST00000477203 POLR1EQ9GZS1 481 aaKnown RBP13.47□□□□□ -0.25
HDAC7-221ENST00000477203 ARHGEF3Q9NR81 526 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 IL37Q9NZH6 218 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 ACOT9Q9Y305 439 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 FAM92AA1XBS5 289 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 TBL1XO60907 577 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 C1RP00736 705 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 SERPINE1P05121 402 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 UBTFL6P0CB48 400 aaPredicted RBP13.47□□□□□ -0.25
HDAC7-221ENST00000477203 CD151P48509 253 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 CTC1Q2NKJ3 1217 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 NXNQ6DKJ4 435 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 ASRGL1Q7L266 308 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 SPRED2Q7Z698 418 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 CENPLQ8N0S6 344 aaPredicted RBP13.47□□□□□ -0.25
HDAC7-221ENST00000477203 OR13J1Q8NGT2 312 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 DNAJC9Q8WXX5 260 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 MYLIPQ8WY64 445 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 SORT1Q99523 831 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 YIPF2Q9BWQ6 316 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.47□□□□□ -0.25
HDAC7-221ENST00000477203 ZNF212Q9UDV6 495 aa13.47□□□□□ -0.25
HDAC7-221ENST00000477203 FCF1Q9Y324 198 aaKnown RBP13.47□□□□□ -0.25
HDAC7-221ENST00000477203 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.47□□□□□ -0.25
HDAC7-221ENST00000477203 G3V2L1 256 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 TEX28O15482 410 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 HDCP19113 662 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 GRIA4P48058 902 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 CDKN1CP49918 316 aaPredicted RBP13.46□□□□□ -0.25
HDAC7-221ENST00000477203 ABCE1P61221 599 aaKnown RBP13.46□□□□□ -0.25
HDAC7-221ENST00000477203 TSTD2Q5T7W7 516 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 FOXB2Q5VYV0 432 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 POTEHQ6S545 545 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 MAVSQ7Z434 540 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 SNX31Q8N9S9 440 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 WFDC5Q8TCV5 224 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 MAPK15Q8TD08 544 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 ACMSDQ8TDX5 336 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 MCUR1Q96AQ8 359 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms