RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 FAM193AP78312 1265 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 BCL2L1Q07817 233 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 ITKQ08881 620 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 WASHC5Q12768 1159 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 SFSWAPQ12872 951 aaKnown RBP12.53□□□□□ -0.4
APTX-220ENST00000476858 HNRNPDQ14103 355 aaKnown RBP12.53□□□□□ -0.4
APTX-220ENST00000476858 KCTD16Q68DU8 428 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 ALG1LQ6GMV1 187 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 BBS12Q6ZW61 710 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 PEX26Q7Z412 305 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 PRPF39Q86UA1 669 aaKnown RBP12.53□□□□□ -0.4
APTX-220ENST00000476858 TSPAN33Q86UF1 283 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 SLC22A18ASQ8N1D0 253 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 OR13H1Q8NG92 308 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 PDCD6IPQ8WUM4 868 aaKnown RBP12.53□□□□□ -0.4
APTX-220ENST00000476858 TUBGCP5Q96RT8 1024 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 MAK16Q9BXY0 300 aaKnown RBP12.53□□□□□ -0.4
APTX-220ENST00000476858 SLC17A9Q9BYT1 436 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 GAREM1Q9H706 876 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 ATP13A3Q9H7F0 1226 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 B4GALT6Q9UBX8 382 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 SUSD2Q9UGT4 822 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 CDV3Q9UKY7 258 aaKnown RBP12.53□□□□□ -0.4
APTX-220ENST00000476858 BTBD3Q9Y2F9 522 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 R3HDM2Q9Y2K5 976 aaKnown RBP12.53□□□□□ -0.4
APTX-220ENST00000476858 PCDHB9Q9Y5E1 797 aa12.53□□□□□ -0.4
APTX-220ENST00000476858 GOLGA6L6A8MZA4 724 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 PRR5-ARHGAP8B1AHC4 643 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 VILLO15195 856 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 FZD6O60353 706 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 LHCGRP22888 699 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 PTPN3P26045 913 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 CD38P28907 300 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 SERPINA4P29622 427 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 IGFALSP35858 605 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 LIG3P49916 1009 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 LIMK1P53667 647 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 NXPH1P58417 271 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 IFI35P80217 286 aaPredicted RBP12.52□□□□□ -0.41
APTX-220ENST00000476858 SKOR1P84550 965 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 ARHGAP8P85298 464 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 RAD51Q06609 339 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 PPP2R5EQ16537 467 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 TMEM52BQ4KMG9 183 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 PLA2G15Q8NCC3 412 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 SPATA22Q8NHS9 363 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 PIH1D2Q8WWB5 315 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 HES6Q96HZ4 224 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 ZNF641Q96N77 438 aaPredicted RBP12.52□□□□□ -0.41
APTX-220ENST00000476858 AGAP3Q96P47 875 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 GORASP1Q9BQQ3 440 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 OSBPL8Q9BZF1 889 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 AMFRQ9UKV5 643 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 CHKBQ9Y259 395 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 PPP2R2CQ9Y2T4 447 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 RAI2Q9Y5P3 530 aa12.52□□□□□ -0.41
APTX-220ENST00000476858 CACNA1EQ15878 2313 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 CCDC66A2RUB6 948 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 NPIPB15A6NHN6 443 aaPredicted RBP12.51□□□□□ -0.41
APTX-220ENST00000476858 TLR4O00206 839 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 NEMP1O14524 444 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 TSPAN6O43657 245 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 PGLSO95336 258 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 CPP00450 1065 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 C6P13671 934 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 MX2P20592 715 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 TGM2P21980 687 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 CD86P42081 329 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 RENBPP51606 427 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 RWDD2BP57060 319 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 RPS21P63220 83 aaKnown RBP12.51□□□□□ -0.41
APTX-220ENST00000476858 OTUD4Q01804 1114 aaKnown RBP12.51□□□□□ -0.41
APTX-220ENST00000476858 BNIP3Q12983 259 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 TFDP2Q14188 446 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 PDK1Q15118 436 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 NOMO1Q15155 1222 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 SETMARQ53H47 684 aaPredicted RBP12.51□□□□□ -0.41
APTX-220ENST00000476858 ODF2Q5BJF6 829 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 ZNF542PQ5EBM4 170 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 KIAA1161Q6NSJ0 714 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 NEK5Q6P3R8 708 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 LIPIQ6XZB0 460 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 KDELC2Q7Z4H8 507 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 GATAD2AQ86YP4 633 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 LRRC49Q8IUZ0 686 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 REXO1L1PQ8IX06 675 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 TP53I13Q8NBR0 393 aaPredicted RBP12.51□□□□□ -0.41
APTX-220ENST00000476858 CCDC112Q8NEF3 446 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 DEFB124Q8NES8 71 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 ACTL9Q8TC94 416 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 FATE1Q969F0 183 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 CENPTQ96BT3 561 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 RBM41Q96IZ5 413 aaKnown RBP12.51□□□□□ -0.41
APTX-220ENST00000476858 FEM1CQ96JP0 617 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 PDLIM2Q96JY6 352 aa12.51□□□□□ -0.41
APTX-220ENST00000476858 QKIQ96PU8 341 aaKnown RBP eCLIP12.51□□□□□ -0.41
APTX-220ENST00000476858 RBM15Q96T37 977 aaKnown RBP eCLIP12.51□□□□□ -0.41
APTX-220ENST00000476858 POLR1EQ9GZS1 481 aaKnown RBP12.51□□□□□ -0.41
APTX-220ENST00000476858 DNAAF2Q9NVR5 837 aaKnown RBP12.51□□□□□ -0.41
APTX-220ENST00000476858 UBP1Q9NZI7 540 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms