RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 ECHDC3Q96DC8 303 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 MRFAP1L1Q96HT8 127 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 BMFQ96LC9 184 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 TBATAQ96M53 351 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 CHP1Q99653 195 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 MGME1Q9BQP7 344 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 WRAP53Q9BUR4 548 aaKnown RBP10.29□□□□□ -0.76
CCM2-208ENST00000476594 PACSIN1Q9BY11 444 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 SPTLC3Q9NUV7 552 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 NLGN3Q9NZ94 848 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 SPASTQ9UBP0 616 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 CSNK1G3Q9Y6M4 447 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 POM121BA6NF01 834 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 PDE2AO00408 941 aaPredicted RBP10.28□□□□□ -0.76
CCM2-208ENST00000476594 PPP1R12AO14974 1030 aaPredicted RBP10.28□□□□□ -0.76
CCM2-208ENST00000476594 MATN3O15232 486 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 MFSD11O43934 449 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 SDC3O75056 442 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 PIAS2O75928 621 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 CSF2P04141 144 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 ATXN1LP0C7T5 689 aaKnown RBP10.28□□□□□ -0.76
CCM2-208ENST00000476594 C6P13671 934 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 NME1P15531 152 aaKnown RBP10.28□□□□□ -0.76
CCM2-208ENST00000476594 JUNDP17535 347 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 DGKAP23743 735 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 CCNCP24863 283 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 MAGEA1P43355 309 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 NOP2P46087 812 aaKnown RBP10.28□□□□□ -0.76
CCM2-208ENST00000476594 LIG3P49916 1009 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 EPHB1P54762 984 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 PFN3P60673 137 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 E2F1Q01094 437 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 GALNT2Q10471 571 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 TBX2Q13207 712 aaPredicted RBP10.28□□□□□ -0.76
CCM2-208ENST00000476594 ZNF211Q13398 564 aaPredicted RBP10.28□□□□□ -0.76
CCM2-208ENST00000476594 MTM1Q13496 603 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 ARHGEF7Q14155 803 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 FGL2Q14314 439 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 AGERQ15109 404 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 SHBQ15464 509 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 LRRC73Q5JTD7 316 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 ARMC12Q5T9G4 340 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 NCBP2-AS2Q69YL0 99 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 TXNRD3NBQ6F5E7 133 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 MACC1Q6ZN28 852 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 ARHGAP36Q6ZRI8 547 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 DPPA4Q7L190 304 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 TMPRSS7Q7RTY8 843 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 TMPRSS12Q86WS5 348 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 PNPLA1Q8N8W4 532 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 NETO2Q8NC67 525 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 CCNYQ8ND76 341 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 OR4C6Q8NH72 309 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 SCG3Q8WXD2 468 aaKnown RBP10.28□□□□□ -0.76
CCM2-208ENST00000476594 SPOCK2Q92563 424 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 FATE1Q969F0 183 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 KLF6Q99612 283 aaPredicted RBP10.28□□□□□ -0.76
CCM2-208ENST00000476594 IL12RB2Q99665 862 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 SLC13A1Q9BZW2 595 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 GPR27Q9NS67 375 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 ETNK2Q9NVF9 386 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 APOBEC3BQ9UH17 382 aaKnown RBP10.28□□□□□ -0.76
CCM2-208ENST00000476594 GGT7Q9UJ14 662 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 KLK13Q9UKR3 277 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 PHTF1Q9UMS5 762 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 DOLKQ9UPQ8 538 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 WASF3Q9UPY6 502 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.28□□□□□ -0.76
CCM2-208ENST00000476594 TTLL3Q9Y4R7 772 aa10.28□□□□□ -0.76
CCM2-208ENST00000476594 PSMD11O00231 422 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 CACNB4O00305 520 aaPredicted RBP10.27□□□□□ -0.77
CCM2-208ENST00000476594 APOL1O14791 398 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 SCAMP1O15126 338 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 RAD51BO15315 384 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 SPINT1O43278 529 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 AQP9O43315 295 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 HTRA2O43464 458 aaPredicted RBP10.27□□□□□ -0.77
CCM2-208ENST00000476594 PSTPIP1O43586 416 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 BUB1BO60566 1050 aaPredicted RBP10.27□□□□□ -0.77
CCM2-208ENST00000476594 DKK1O94907 266 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 KRT1P04264 644 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 ALPIP09923 528 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 CTSEP14091 401 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 SPINK2P20155 84 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 KDELR1P24390 212 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 IGFALSP35858 605 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 RGRP47804 291 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 RPIAP49247 311 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 ARSEP51690 589 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 PPARDQ03181 441 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 MMRN1Q13201 1228 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 TFDP2Q14188 446 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 FZD2Q14332 565 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 PDK1Q15118 436 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 TCEAL1Q15170 157 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 IRF4Q15306 451 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 ELOCQ15369 112 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 ZCCHC8Q6NZY4 707 aaKnown RBP10.27□□□□□ -0.77
CCM2-208ENST00000476594 SLCO6A1Q86UG4 719 aa10.27□□□□□ -0.77
CCM2-208ENST00000476594 CCDC13Q8IYE1 715 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms