RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 COL6A2P12110 1019 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 ACTN3Q08043 901 aaPredicted RBP23.17■■□□□ 1.3
CCDC7-206ENST00000476558 ZNF789Q5FWF6 425 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 RALGPS1Q5JS13 557 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 CNSTQ6PJW8 725 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 CEP97Q8IW35 865 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 CMTM8Q8IZV2 173 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 TMEM151AQ8N4L1 468 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 GBP7Q8N8V2 638 aaPredicted RBP23.17■■□□□ 1.3
CCDC7-206ENST00000476558 STYXQ8WUJ0 223 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 SMG9Q9H0W8 520 aaKnown RBP23.17■■□□□ 1.3
CCDC7-206ENST00000476558 CCL26Q9Y258 94 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 SPO11Q9Y5K1 396 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 CCDC195A0A1B0GUA6 201 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 SOBPA7XYQ1 873 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 CCL22O00626 93 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 UBOX5O94941 541 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 MT-CO1P00395 513 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 PDHA1P08559 390 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 SCTRP47872 440 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 RAB10P61026 200 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 STX3Q13277 289 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 SLC12A1Q13621 1099 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 GPR158Q5T848 1215 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 GPR150Q8NGU9 434 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 SH3RF2Q8TEC5 729 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 BHMTQ93088 406 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 DNAJC1Q96KC8 554 aaKnown RBP23.16■■□□□ 1.3
CCDC7-206ENST00000476558 LMLNQ96KR4 655 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 TBATAQ96M53 351 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 MTIF3Q9H2K0 278 aaKnown RBP23.16■■□□□ 1.3
CCDC7-206ENST00000476558 FBXO6Q9NRD1 293 aaPredicted RBP23.16■■□□□ 1.3
CCDC7-206ENST00000476558 TLK1Q9UKI8 766 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 PCDHGC4Q9Y5F7 938 aa23.16■■□□□ 1.3
CCDC7-206ENST00000476558 G3V2L1 256 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 PHGDHO43175 533 aaKnown RBP23.15■■□□□ 1.3
CCDC7-206ENST00000476558 CLASP2O75122 1294 aaKnown RBP23.15■■□□□ 1.3
CCDC7-206ENST00000476558 S1PR4O95977 384 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 PIRTP0C851 137 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 CPA3P15088 417 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 KCNA4P22459 653 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 ZNF140P52738 457 aaPredicted RBP23.15■■□□□ 1.3
CCDC7-206ENST00000476558 PLK1P53350 603 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 PRAMEP78395 509 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 POU4F1Q01851 419 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 PTPRCAPQ14761 206 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 PTAR1Q7Z6K3 402 aaPredicted RBP23.15■■□□□ 1.3
CCDC7-206ENST00000476558 C10orf107Q8IVU9 208 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 CENPLQ8N0S6 344 aaPredicted RBP23.15■■□□□ 1.3
CCDC7-206ENST00000476558 TTC16Q8NEE8 873 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 OR6P1Q8NGX9 317 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 RIN3Q8TB24 985 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 MICAL1Q8TDZ2 1067 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 ACDQ96AP0 544 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 OMDQ99983 421 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 C2orf49Q9BVC5 232 aaPredicted RBP23.15■■□□□ 1.3
CCDC7-206ENST00000476558 TASP1Q9H6P5 420 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 ZNF395Q9H8N7 513 aaPredicted RBP23.15■■□□□ 1.3
CCDC7-206ENST00000476558 NMRAL1Q9HBL8 299 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 THAP1Q9NVV9 213 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 MARCH4Q9P2E8 410 aaPredicted RBP23.15■■□□□ 1.3
CCDC7-206ENST00000476558 RPP40O75818 363 aaKnown RBP23.15■■□□□ 1.3
CCDC7-206ENST00000476558 RHOP08100 348 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 MYOGP15173 224 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 EPCAMP16422 314 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 STMN1P16949 149 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 CRABP2P29373 138 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 PGGT1BP53609 377 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 TAS2R39P59534 338 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 LMAN2Q12907 356 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 TRAF2Q12933 501 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 TEAD2Q15562 447 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 SUDS3Q9H7L9 328 aaPredicted RBP23.15■■□□□ 1.3
CCDC7-206ENST00000476558 NLE1Q9NVX2 485 aaPredicted RBP23.15■■□□□ 1.3
CCDC7-206ENST00000476558 PLK2Q9NYY3 685 aa23.15■■□□□ 1.3
CCDC7-206ENST00000476558 KIAA1522Q9P206 1035 aaPredicted RBP23.15■■□□□ 1.3
CCDC7-206ENST00000476558 ANKRD66B4E2M5 251 aa23.14■■□□□ 1.29
CCDC7-206ENST00000476558 FZD6O60353 706 aa23.14■■□□□ 1.29
CCDC7-206ENST00000476558 CRTAMO95727 393 aa23.14■■□□□ 1.29
CCDC7-206ENST00000476558 HNRNPA1P09651 372 aaKnown RBP eCLIP23.14■■□□□ 1.29
CCDC7-206ENST00000476558 LIG3P49916 1009 aa23.14■■□□□ 1.29
CCDC7-206ENST00000476558 CLCN5P51795 746 aa23.14■■□□□ 1.29
CCDC7-206ENST00000476558 BNIP1Q12981 228 aa23.14■■□□□ 1.29
CCDC7-206ENST00000476558 TAF1AQ15573 450 aaPredicted RBP23.14■■□□□ 1.29
CCDC7-206ENST00000476558 SLC5A9Q2M3M2 681 aa23.14■■□□□ 1.29
CCDC7-206ENST00000476558 TAF1BQ53T94 588 aaPredicted RBP23.14■■□□□ 1.29
CCDC7-206ENST00000476558 ZCCHC23Q6ZST2 131 aa23.14■■□□□ 1.29
CCDC7-206ENST00000476558 TPGS1Q6ZTW0 290 aa23.14■■□□□ 1.29
CCDC7-206ENST00000476558 RAPH1Q70E73 1250 aa23.14■■□□□ 1.29
CCDC7-206ENST00000476558 TNS4Q8IZW8 715 aa23.14■■□□□ 1.29
CCDC7-206ENST00000476558 MDGA1Q8NFP4 955 aa23.14■■□□□ 1.29
CCDC7-206ENST00000476558 OR13C4Q8NGS5 318 aa23.14■■□□□ 1.29
CCDC7-206ENST00000476558 USP13Q92995 863 aaPredicted RBP23.14■■□□□ 1.29
CCDC7-206ENST00000476558 RMDN1Q96DB5 314 aa23.14■■□□□ 1.29
CCDC7-206ENST00000476558 GPR78Q96P69 363 aa23.14■■□□□ 1.29
CCDC7-206ENST00000476558 ACOT9Q9Y305 439 aa23.14■■□□□ 1.29
CCDC7-206ENST00000476558 FCF1Q9Y324 198 aaKnown RBP23.14■■□□□ 1.29
CCDC7-206ENST00000476558 CHD7Q9P2D1 2997 aa23.14■■□□□ 1.29
CCDC7-206ENST00000476558 CXorf51AA0A1B0GTR3 108 aa23.13■■□□□ 1.29
CCDC7-206ENST00000476558 CCDC162PA2VCL2 907 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms