RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 PDPK2PQ6A1A2 396 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 DENND5AQ6IQ26 1287 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 C22orf39Q6P5X5 142 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 TMEM135Q86UB9 458 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 SLC26A11Q86WA9 606 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 RASSF3Q86WH2 238 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 PLPP6Q8IY26 295 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 PPM1NQ8N819 430 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 FAM76AQ8TAV0 307 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 PDCD6IPQ8WUM4 868 aaKnown RBP12.33□□□□□ -0.44
MRPL55-227ENST00000475832 ZBTB9Q96C00 473 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 ZFYVE19Q96K21 471 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 RPL10LQ96L21 214 aaKnown RBP12.33□□□□□ -0.44
MRPL55-227ENST00000475832 PAFAH2Q99487 392 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 KXD1Q9BQD3 176 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 WDR83Q9BRX9 315 aaKnown RBP12.33□□□□□ -0.44
MRPL55-227ENST00000475832 TM6SF2Q9BZW4 377 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 BRD9Q9H8M2 597 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 HACD3Q9P035 362 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 SENP1Q9P0U3 644 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 ZFATQ9P243 1243 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 LGALS13Q9UHV8 139 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 NOVA2Q9UNW9 492 aaKnown RBP12.33□□□□□ -0.44
MRPL55-227ENST00000475832 ACTL7AQ9Y615 435 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 EPG5Q9HCE0 2579 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 NYNRINQ9P2P1 1898 aaKnown RBP12.33□□□□□ -0.44
MRPL55-227ENST00000475832 NOTCH4Q99466 2003 aa12.33□□□□□ -0.44
MRPL55-227ENST00000475832 DOCK6Q96HP0 2047 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 NUP210Q8TEM1 1887 aaPredicted RBP12.32□□□□□ -0.44
MRPL55-227ENST00000475832 C2orf81A6NN90 581 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 H3BQF6 201 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 K7ERQ8 282 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 PAPSS2O95340 614 aaPredicted RBP12.32□□□□□ -0.44
MRPL55-227ENST00000475832 CISD3P0C7P0 127 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 SP100P23497 879 aaPredicted RBP12.32□□□□□ -0.44
MRPL55-227ENST00000475832 AVPR2P30518 371 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 RGRP47804 291 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 GRIA4P48058 902 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 ILF2Q12905 390 aaKnown RBP12.32□□□□□ -0.44
MRPL55-227ENST00000475832 THOC5Q13769 683 aaKnown RBP12.32□□□□□ -0.44
MRPL55-227ENST00000475832 TMED2Q15363 201 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 MYLK3Q32MK0 819 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 KBTBD12Q3ZCT8 623 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 ATXN7L2Q5T6C5 722 aaPredicted RBP12.32□□□□□ -0.44
MRPL55-227ENST00000475832 KCTD16Q68DU8 428 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 ASTLQ6HA08 431 aaPredicted RBP12.32□□□□□ -0.44
MRPL55-227ENST00000475832 PARM1Q6UWI2 310 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 ADIPOR2Q86V24 386 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 AGGF1Q8N302 714 aaeCLIP12.32□□□□□ -0.44
MRPL55-227ENST00000475832 KDM1BQ8NB78 822 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 LPCAT1Q8NF37 534 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 CALML6Q8TD86 181 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 BRSK1Q8TDC3 778 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 PEX13Q92968 403 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 NXPE3Q969Y0 559 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 ARL8AQ96BM9 186 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 MRRFQ96E11 262 aaKnown RBP12.32□□□□□ -0.44
MRPL55-227ENST00000475832 ASIC4Q96FT7 647 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 CERS2Q96G23 380 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 MYO19Q96H55 970 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 CHRAC1Q9NRG0 131 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 C20orf96Q9NUD7 363 aaPredicted RBP12.32□□□□□ -0.44
MRPL55-227ENST00000475832 ELOVL2Q9NXB9 296 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 MOCS1Q9NZB8 636 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.32□□□□□ -0.44
MRPL55-227ENST00000475832 HECAQ9UBI9 543 aaPredicted RBP12.32□□□□□ -0.44
MRPL55-227ENST00000475832 EVLQ9UI08 416 aaPredicted RBP12.32□□□□□ -0.44
MRPL55-227ENST00000475832 ZNF180Q9UJW8 692 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 CHKBQ9Y259 395 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 PCDHGC4Q9Y5F7 938 aa12.32□□□□□ -0.44
MRPL55-227ENST00000475832 DOCK8Q8NF50 2099 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 MED19A0JLT2 244 aaPredicted RBP12.31□□□□□ -0.44
MRPL55-227ENST00000475832 TBC1D3BA6NDS4 549 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 FAM159BA6NKW6 160 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 POLR3GO15318 223 aaPredicted RBP12.31□□□□□ -0.44
MRPL55-227ENST00000475832 SMAD6O43541 496 aaKnown RBP12.31□□□□□ -0.44
MRPL55-227ENST00000475832 BNIP3LO60238 219 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 APODP05090 189 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 ATXN1LP0C7T5 689 aaKnown RBP12.31□□□□□ -0.44
MRPL55-227ENST00000475832 CTSOP43234 321 aaPredicted RBP12.31□□□□□ -0.44
MRPL55-227ENST00000475832 CHRNA4P43681 627 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 STK19P49842 368 aaPredicted RBP12.31□□□□□ -0.44
MRPL55-227ENST00000475832 MAGOHP61326 146 aaKnown RBP12.31□□□□□ -0.44
MRPL55-227ENST00000475832 POLR2LP62875 67 aaKnown RBP12.31□□□□□ -0.44
MRPL55-227ENST00000475832 ZXDAP98168 799 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 GALNT3Q14435 633 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 UGP2Q16851 508 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 GEN1Q17RS7 908 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 TTMPQ5BVD1 217 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 UBAP2Q5T6F2 1119 aaKnown RBP12.31□□□□□ -0.44
MRPL55-227ENST00000475832 ADGRD1Q6QNK2 874 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 KCNMB4Q86W47 210 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 ETFBKMTQ8IXQ9 262 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 LMNTD2Q8IXW0 634 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 BLOC1S5Q8TDH9 187 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 SLC44A1Q8WWI5 657 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 MTBPQ96DY7 904 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 ZNF641Q96N77 438 aaPredicted RBP12.31□□□□□ -0.44
MRPL55-227ENST00000475832 TRIB3Q96RU7 358 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 FAM167BQ9BTA0 163 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms