RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 APOBEC3BQ9UH17 382 aaKnown RBP7.08□□□□□ -1.28
HDAC3-207ENST00000475549 MYO6Q9UM54 1294 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 AP4E1Q9UPM8 1137 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 ENTPD2Q9Y5L3 495 aa7.08□□□□□ -1.28
HDAC3-207ENST00000475549 GCN1Q92616 2671 aaKnown RBP7.08□□□□□ -1.28
HDAC3-207ENST00000475549 DOCK9Q9BZ29 2069 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 A0A1B0GTH6 734 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 A0A1W2PQM1 296 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 TMEM202A6NGA9 273 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 A8MX80 341 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 H3BM21 787 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 NTN3O00634 580 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-207ENST00000475549 RRP8O43159 456 aaKnown RBP7.07□□□□□ -1.28
HDAC3-207ENST00000475549 LRCH4O75427 683 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 PALMO75781 387 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 FUCA1P04066 466 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 GZMAP12544 262 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 IL4RP24394 825 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 HTR7P34969 479 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 ACTN2P35609 894 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 MMP12P39900 470 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 PRKCIP41743 596 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 CSNK1DP48730 415 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 HCAR3P49019 387 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 PEX5P50542 639 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 DUSP3P51452 185 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-207ENST00000475549 SUOXP51687 545 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 SRP54P61011 504 aaKnown RBP7.07□□□□□ -1.28
HDAC3-207ENST00000475549 SKOR1P84550 965 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 PPARDQ03181 441 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 RAD51Q06609 339 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 NSUN2Q08J23 767 aaKnown RBP eCLIP7.07□□□□□ -1.28
HDAC3-207ENST00000475549 DPYSQ14117 519 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 IHHQ14623 411 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 NR1I3Q14994 352 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 IQCB1Q15051 598 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 NR0B2Q15466 257 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 HS1BP3Q53T59 392 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 CCDC183Q5T5S1 534 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 FAXCQ5TGI0 409 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 HGSNATQ68CP4 663 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 SRLQ86TD4 932 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 HID1Q8IV36 788 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 CBARPQ8N350 705 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-207ENST00000475549 PGBD5Q8N414 524 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 FNIP1Q8TF40 1166 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 PTCD2Q8WV60 388 aaKnown RBP7.07□□□□□ -1.28
HDAC3-207ENST00000475549 BTN2A2Q8WVV5 523 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 NAF1Q96HR8 494 aaKnown RBP7.07□□□□□ -1.28
HDAC3-207ENST00000475549 TBATAQ96M53 351 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 ZNF578Q96N58 590 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-207ENST00000475549 FCRL3Q96P31 734 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-207ENST00000475549 DEPDC7Q96QD5 511 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 TUBGCP5Q96RT8 1024 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 CCDC3Q9BQI4 270 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 BPIFA3Q9BQP9 254 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 FUCA2Q9BTY2 467 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 APOOQ9BUR5 198 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 LGR4Q9BXB1 951 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 SLC13A1Q9BZW2 595 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 ISCUQ9H1K1 167 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 DHX35Q9H5Z1 703 aaKnown RBP7.07□□□□□ -1.28
HDAC3-207ENST00000475549 POLR1BQ9H9Y6 1135 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 CPNE5Q9HCH3 593 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 ETNK2Q9NVF9 386 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 PADI4Q9UM07 663 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 SATB2Q9UPW6 733 aa7.07□□□□□ -1.28
HDAC3-207ENST00000475549 A0A0U1RQS6 177 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 A0A1W2PQC6 194 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 ANKRD62A6NC57 917 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 ARHGAP42A6NI28 874 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 DFFAO00273 331 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 TOR1BO14657 336 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 ATXN7O15265 892 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-207ENST00000475549 EFSO43281 561 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 RECQL5O94762 991 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-207ENST00000475549 ANXA6P08133 673 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 CCDC172P0C7W6 258 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 CR2P20023 1033 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 AMPD1P23109 780 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 TRIM23P36406 574 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 ANP32AP39687 249 aaKnown RBP7.06□□□□□ -1.28
HDAC3-207ENST00000475549 SCNN1BP51168 640 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 ERVPABLB-1P60509 514 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 ELP6Q0PNE2 266 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 NFATC4Q14934 902 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 PPP6R3Q5H9R7 873 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-207ENST00000475549 C3orf38Q5JPI3 329 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 BRAT1Q6PJG6 821 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 OGFOD3Q6PK18 319 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 IGF2-ASQ6U949 168 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 ENPP7Q6UWV6 458 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 LIPIQ6XZB0 460 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 LRRC69Q6ZNQ3 347 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 RBM44Q6ZP01 1051 aaKnown RBP7.06□□□□□ -1.28
HDAC3-207ENST00000475549 DPPA4Q7L190 304 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 GPR155Q7Z3F1 870 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 RD3Q7Z3Z2 195 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 POLNQ7Z5Q5 900 aa7.06□□□□□ -1.28
HDAC3-207ENST00000475549 B3GNT8Q7Z7M8 397 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms