RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 LRRC6Q86X45 466 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 ZNF354CQ86Y25 554 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 CNTN4Q8IWV2 1026 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 FAM160A2Q8N612 972 aaPredicted RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 PCDH20Q8N6Y1 951 aaKnown RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 GOLGA6L1Q8N7Z2 621 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 DNAAF3Q8N9W5 541 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 OR2AP1Q8NGE2 309 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 UHMK1Q8TAS1 419 aaKnown RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 BRSK1Q8TDC3 778 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 EPS8L3Q8TE67 593 aaKnown RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 FRS2Q8WU20 508 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 SCG3Q8WXD2 468 aaKnown RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 ISL2Q96A47 359 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 CHFRQ96EP1 664 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 CERS2Q96G23 380 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 SGSM3Q96HU1 749 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 TUBGCP5Q96RT8 1024 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 LYSMD1Q96S90 227 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 APOL2Q9BQE5 337 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 TRIM56Q9BRZ2 755 aaKnown RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 FSD1LQ9BXM9 530 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 PLA2G2FQ9BZM2 168 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 STMN4Q9H169 189 aaPredicted RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 POMKQ9H5K3 350 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 ECT2Q9H8V3 914 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 VPS37BQ9H9H4 285 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 SSU72Q9NP77 194 aaKnown RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 TRPV5Q9NQA5 729 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 PSMC3IPQ9P2W1 217 aaPredicted RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 MAD1L1Q9Y6D9 718 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 RPS6KL1Q9Y6S9 549 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 C2orf16Q68DN1 1984 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 MYO18AQ92614 2054 aaKnown RBP6.66□□□□□ -1.34
ATG4A-207ENST00000474825 A0A1W2PQ67 120 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 TSPAN11A1L157 253 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 HEATR9A2RTY3 570 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 HMX2A2RU54 273 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 ANKRD66B4E2M5 251 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 J3QL48 77 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 RGS16O15492 202 aaPredicted RBP6.66□□□□□ -1.34
ATG4A-207ENST00000474825 TULP3O75386 442 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 PGLSO95336 258 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 DLDP09622 509 aaKnown RBP6.66□□□□□ -1.34
ATG4A-207ENST00000474825 TPH1P17752 444 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 PSMC3P17980 439 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 CNTFP26441 200 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 NMBRP28336 390 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 ATP5DP30049 168 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 OPRD1P41143 372 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 CTSOP43234 321 aaPredicted RBP6.66□□□□□ -1.34
ATG4A-207ENST00000474825 MSH2P43246 934 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 DGKGP49619 791 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 SERPINB9P50453 376 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 CSRP3P50461 194 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 SCNN1BP51168 640 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 RHOAP61586 193 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 FAM193AP78312 1265 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 ITKQ08881 620 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 ILF2Q12905 390 aaKnown RBP6.66□□□□□ -1.34
ATG4A-207ENST00000474825 TRAF2Q12933 501 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 MTM1Q13496 603 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 HTR4Q13639 388 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 RUNX3Q13761 415 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 ENPP2Q13822 863 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 GRM3Q14832 879 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 EIF4HQ15056 248 aaKnown RBP6.66□□□□□ -1.34
ATG4A-207ENST00000474825 CDKN3Q16667 212 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 QPCTQ16769 361 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 PTPRNQ16849 979 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 MYLK3Q32MK0 819 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 TSTD2Q5T7W7 516 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 MBLAC2Q68D91 279 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 PDPK2PQ6A1A2 396 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 TRIM68Q6AZZ1 485 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 C22orf39Q6P5X5 142 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 PARM1Q6UWI2 310 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 KDM7AQ6ZMT4 941 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 MTSS1LQ765P7 747 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 TRABD2AQ86V40 505 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 C12orf40Q86WS4 652 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 LMNTD2Q8IXW0 634 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 PPHLN1Q8NEY8 458 aaKnown RBP6.66□□□□□ -1.34
ATG4A-207ENST00000474825 OR13J1Q8NGT2 312 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 HCAR2Q8TDS4 363 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 PIH1D2Q8WWB5 315 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 FGF14Q92915 247 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 BHMTQ93088 406 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 NXPE3Q969Y0 559 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 MTBPQ96DY7 904 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 MFSD3Q96ES6 412 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 CFAP36Q96G28 342 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 LRIG1Q96JA1 1093 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 ZNF778Q96MU6 729 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 ZNF641Q96N77 438 aaPredicted RBP6.66□□□□□ -1.34
ATG4A-207ENST00000474825 SRPK1Q96SB4 655 aaKnown RBP6.66□□□□□ -1.34
ATG4A-207ENST00000474825 PAFAH2Q99487 392 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 TRABDQ9H4I3 376 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 PRDM6Q9NQX0 595 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms