RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 CINPQ9BW66 212 aaPredicted RBP7.06□□□□□ -1.28
LIMD1-204ENST00000474665 AP1M1Q9BXS5 423 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 NEUROG2Q9H2A3 272 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 ZDHHC6Q9H6R6 413 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 FBRSQ9HAH7 460 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 TMEM9BQ9NQ34 198 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 SEPT10Q9P0V9 454 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 IL36AQ9UHA7 158 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 CYP8B1Q9UNU6 501 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 SLCO1B1Q9Y6L6 691 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 CELSR3Q9NYQ7 3312 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 PCNX2A6NKB5 2137 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 TDRD6O60522 2096 aaKnown RBP7.05□□□□□ -1.28
LIMD1-204ENST00000474665 MYLKQ15746 1914 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 A0A1W2PP55 124 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 CTAGE9A4FU28 777 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 C16orf96A6NNT2 1141 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 F5H423 210 aaPredicted RBP7.05□□□□□ -1.28
LIMD1-204ENST00000474665 H7C0C1 242 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 KPNA3O00505 521 aaPredicted RBP7.05□□□□□ -1.28
LIMD1-204ENST00000474665 CES2O00748 559 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 AREL1O15033 823 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 FZD6O60353 706 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 ALDH1A2O94788 518 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 IGSF6O95976 241 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 PDHA1P08559 390 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 ETS1P14921 441 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 C5AR1P21730 350 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 ITGB7P26010 798 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 HSPA9P38646 679 aaKnown RBP7.05□□□□□ -1.28
LIMD1-204ENST00000474665 CETN2P41208 172 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 ABL2P42684 1182 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 ATP5OP48047 213 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 AP1S1P61966 158 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 FAM193AP78312 1265 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 CREB5Q02930 508 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 ZBTB16Q05516 673 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 SNX1Q13596 522 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 BYSLQ13895 437 aaKnown RBP7.05□□□□□ -1.28
LIMD1-204ENST00000474665 ZNF235Q14590 738 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 CCNG2Q16589 344 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 CYP1B1Q16678 543 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 LONRF2Q1L5Z9 754 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 ZNF805Q5CZA5 627 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 LRRC73Q5JTD7 316 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 CCDC181Q5TID7 509 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 TIGD7Q6NT04 549 aaPredicted RBP7.05□□□□□ -1.28
LIMD1-204ENST00000474665 DRICH1Q6PGQ1 229 aaPredicted RBP7.05□□□□□ -1.28
LIMD1-204ENST00000474665 DARS2Q6PI48 645 aaKnown RBP7.05□□□□□ -1.28
LIMD1-204ENST00000474665 KDELC1Q6UW63 502 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 GDPD4Q6W3E5 623 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 BZW1Q7L1Q6 419 aaKnown RBP7.05□□□□□ -1.28
LIMD1-204ENST00000474665 PARS2Q7L3T8 475 aaKnown RBP7.05□□□□□ -1.28
LIMD1-204ENST00000474665 FAM124AQ86V42 546 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 KLHDC8BQ8IXV7 354 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 RYBPQ8N488 228 aaPredicted RBP7.05□□□□□ -1.28
LIMD1-204ENST00000474665 HDDC3Q8N4P3 179 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 TTC13Q8NBP0 860 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 SPATA22Q8NHS9 363 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 CCDC110Q8TBZ0 833 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 PIH1D2Q8WWB5 315 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 PRCCQ92733 491 aaPredicted RBP7.05□□□□□ -1.28
LIMD1-204ENST00000474665 RTP4Q96DX8 246 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 IMP4Q96G21 291 aaKnown RBP7.05□□□□□ -1.28
LIMD1-204ENST00000474665 TOE1Q96GM8 510 aaKnown RBP7.05□□□□□ -1.28
LIMD1-204ENST00000474665 SPATA13Q96N96 652 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 TRIB3Q96RU7 358 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 ORAI3Q9BRQ5 295 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 MLPHQ9BV36 600 aaPredicted RBP7.05□□□□□ -1.28
LIMD1-204ENST00000474665 HDAC8Q9BY41 377 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 SUV39H2Q9H5I1 410 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 GLOD4Q9HC38 313 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 FBXL12Q9NXK8 326 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 WSB2Q9NYS7 404 aaPredicted RBP7.05□□□□□ -1.28
LIMD1-204ENST00000474665 BCCIPQ9P287 314 aaKnown RBP eCLIP7.05□□□□□ -1.28
LIMD1-204ENST00000474665 DKK3Q9UBP4 350 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 AMACRQ9UHK6 382 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 GGT7Q9UJ14 662 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 SRPK3Q9UPE1 567 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 NEU2Q9Y3R4 380 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 PCDHGC4Q9Y5F7 938 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 KALRNO60229 2985 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 SPTA1P02549 2419 aa7.05□□□□□ -1.28
LIMD1-204ENST00000474665 PLXNA2O75051 1894 aa7.04□□□□□ -1.28
LIMD1-204ENST00000474665 SCN8AQ9UQD0 1980 aa7.04□□□□□ -1.28
LIMD1-204ENST00000474665 KNTC1P50748 2209 aa7.04□□□□□ -1.28
LIMD1-204ENST00000474665 ARHGEF17Q96PE2 2063 aaPredicted RBP7.04□□□□□ -1.28
LIMD1-204ENST00000474665 A0A0U1RQS6 177 aa7.04□□□□□ -1.28
LIMD1-204ENST00000474665 C5orf60A6NFR6 353 aa7.04□□□□□ -1.28
LIMD1-204ENST00000474665 PATE3B3GLJ2 98 aa7.04□□□□□ -1.28
LIMD1-204ENST00000474665 PGRMC1O00264 195 aaKnown RBP7.04□□□□□ -1.28
LIMD1-204ENST00000474665 KCNN4O15554 427 aa7.04□□□□□ -1.28
LIMD1-204ENST00000474665 MTSS1O43312 755 aa7.04□□□□□ -1.28
LIMD1-204ENST00000474665 PLRG1O43660 514 aaKnown RBP7.04□□□□□ -1.28
LIMD1-204ENST00000474665 GCATO75600 419 aa7.04□□□□□ -1.28
LIMD1-204ENST00000474665 RNASEH2AO75792 299 aaKnown RBP7.04□□□□□ -1.28
LIMD1-204ENST00000474665 PGLSO95336 258 aa7.04□□□□□ -1.28
LIMD1-204ENST00000474665 METTL18O95568 372 aa7.04□□□□□ -1.28
LIMD1-204ENST00000474665 MT-CYBP00156 380 aaPredicted RBP7.04□□□□□ -1.28
LIMD1-204ENST00000474665 ADH1BP00325 375 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms