RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 LIPCP11150 499 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 UCHL3P15374 230 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 TIMP2P16035 220 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 ITIH1P19827 911 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 PEX5P50542 639 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 NFKB2Q00653 900 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 INPP5AQ14642 412 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 WSCD2Q2TBF2 565 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 TMEM52BQ4KMG9 183 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 LVRNQ6Q4G3 990 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 STRADAQ7RTN6 431 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 VASH2Q86V25 355 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 CCNJLQ8IV13 435 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 PYROXD2Q8N2H3 581 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 MLKLQ8NB16 471 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 ATL2Q8NHH9 583 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 SLC30A5Q8TAD4 765 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 PDXPQ96GD0 296 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 WDR92Q96MX6 357 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 APOOQ9BUR5 198 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 NAA15Q9BXJ9 866 aaKnown RBP14.12□□□□□ -0.15
CCDC78-209ENST00000474647 KLC2Q9H0B6 622 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 RETREG1Q9H6L5 497 aa14.12□□□□□ -0.15
CCDC78-209ENST00000474647 C2CD4BA6NLJ0 364 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 B4DGG1 531 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 CREB3O43889 395 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 TNFP01375 233 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 PTMSP20962 102 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 EPHB2P29323 1055 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 CCKBRP32239 447 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 PTPN9P43378 593 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 MAPK10P53779 464 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 HDAC4P56524 1084 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 LINC00303Q3SY05 128 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 MANEAQ5SRI9 462 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 RTL3Q8N8U3 475 aaKnown RBP14.11□□□□□ -0.15
CCDC78-209ENST00000474647 OR6C4Q8NGE1 309 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 CASKIN2Q8WXE0 1202 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 HMCESQ96FZ2 354 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 NOL6Q9H6R4 1146 aaKnown RBP14.11□□□□□ -0.15
CCDC78-209ENST00000474647 PCDH12Q9NPG4 1184 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 SEPT10Q9P0V9 454 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 DKK3Q9UBP4 350 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 NOCTQ9UK39 431 aaKnown RBP14.11□□□□□ -0.15
CCDC78-209ENST00000474647 MFHAS1Q9Y4C4 1052 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 DAAM1Q9Y4D1 1078 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 DOPEY2Q9Y3R5 2298 aa14.11□□□□□ -0.15
CCDC78-209ENST00000474647 PRAMEF33A0A0G2JMD5 474 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 RASA4BC9J798 803 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 RASA4O43374 803 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 NOBOXO60393 691 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 PRAMEF10O60809 474 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 PRKCGP05129 697 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 FAM87AP0C7U9 286 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 GPD1P21695 349 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 MMP8P22894 467 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 LIG3P49916 1009 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 CSRP3P50461 194 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 UGP2Q16851 508 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 INO80DQ53TQ3 878 aaPredicted RBP14.1□□□□□ -0.15
CCDC78-209ENST00000474647 EFHC2Q5JST6 749 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 PHF19Q5T6S3 580 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 KCTD16Q68DU8 428 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 ERAP2Q6P179 960 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 SCYL2Q6P3W7 929 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 TAF8Q7Z7C8 310 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 SLFN11Q7Z7L1 901 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 ZNF677Q86XU0 584 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 DNAAF5Q86Y56 855 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 PAF1Q8N7H5 531 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 SELENOOQ9BVL4 669 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 STK33Q9BYT3 514 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 MRPL40Q9NQ50 206 aaKnown RBP14.1□□□□□ -0.15
CCDC78-209ENST00000474647 LHX3Q9UBR4 397 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 UBA2Q9UBT2 640 aaPredicted RBP14.1□□□□□ -0.15
CCDC78-209ENST00000474647 MOSPD1Q9UJG1 213 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 ZNF106Q9H2Y7 1883 aaKnown RBP14.1□□□□□ -0.15
CCDC78-209ENST00000474647 SPTA1P02549 2419 aa14.1□□□□□ -0.15
CCDC78-209ENST00000474647 MBD3O95983 291 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 CYP1A1P04798 512 aaPredicted RBP14.09□□□□□ -0.15
CCDC78-209ENST00000474647 KRT3P12035 628 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 MMP12P39900 470 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 ETV5P41161 510 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 SUOXP51687 545 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 FMO1Q01740 532 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 CDR2Q01850 454 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 MTM1Q13496 603 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 SERINC3Q13530 473 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 ARHGEF7Q14155 803 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 DPCR1Q3MIW9 517 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 MAP9Q49MG5 647 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 SPRED1Q7Z699 444 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 ZFAND4Q86XD8 727 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 SFTPA2Q8IWL1 248 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 ZSCAN1Q8NBB4 408 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 PLA2G15Q8NCC3 412 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 FAM46DQ8NEK8 389 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 GPR156Q8NFN8 814 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 NTAN1Q96AB6 310 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 RBM15Q96T37 977 aaKnown RBP eCLIP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms