RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 MLF2Q15773 248 aaPredicted RBP10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 UAP1Q16222 522 aaPredicted RBP10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 SKIDA1Q1XH10 827 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 GAB4Q2WGN9 574 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 MSS51Q4VC12 460 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 CEP85LQ5SZL2 805 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 CERCAMQ5T4B2 595 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 EGFLAMQ63HQ2 1017 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 LRIG3Q6UXM1 1119 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 RANBP10Q6VN20 620 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 ZNF852Q6ZMS4 543 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 ZNF534Q76KX8 674 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 MTERF4Q7Z6M4 381 aaKnown RBP10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 RASSF3Q86WH2 238 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 KLHDC8BQ8IXV7 354 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 ZNF366Q8N895 744 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 CALML6Q8TD86 181 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 MRGPRX3Q96LB0 322 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 KLHL32Q96NJ5 620 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 RANBP9Q96S59 729 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 TRABDQ9H4I3 376 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 FBRSQ9HAH7 460 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 ARNT2Q9HBZ2 717 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 MRM3Q9HC36 420 aaKnown RBP10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 SLC2A4RGQ9NR83 387 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 NSMCE4AQ9NXX6 385 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 CACNA2D2Q9NY47 1150 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 ZFATQ9P243 1243 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 THAP10Q9P2Z0 257 aaPredicted RBP10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 PHTF1Q9UMS5 762 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 SOX13Q9UN79 622 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 DUSP12Q9UNI6 340 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 TCAF1Q9Y4C2 921 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 STON1Q9Y6Q2 735 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 TLDC2A0PJX2 215 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 ANKRD66B4E2M5 251 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 WASH3PC4AMC7 463 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 POC1B-GALNT4F8VUJ3 575 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 NEMP1O14524 444 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 TP73O15350 636 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 STX7O15400 261 aaKnown RBP10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 SIN3BO75182 1162 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 LEFTY1O75610 366 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 GJB3O75712 270 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 NUDT17P0C025 328 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 HLA-EP13747 358 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 HNRNPLP14866 589 aaKnown RBP eCLIP10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 SSTR1P30872 391 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 HADHAP40939 763 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 MSH2P43246 934 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 MRPS21P82921 87 aaKnown RBP10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 PRKCQQ04759 706 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 NAB1Q13506 487 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 CRYMQ14894 314 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 PTPRNQ16849 979 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 LONRF1Q17RB8 773 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 HSF5Q4G112 596 aaPredicted RBP10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 SLC44A4Q53GD3 710 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 C2orf27AQ580R0 203 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 ZNF805Q5CZA5 627 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 ARSIQ5FYB1 569 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 EOGTQ5NDL2 527 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 LGSNQ5TDP6 509 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 PDPK2PQ6A1A2 396 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 PKN3Q6P5Z2 889 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 FBXL19Q6PCT2 694 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 UNC5AQ6ZN44 842 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 STK40Q8N2I9 435 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 MPP5Q8N3R9 675 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 PHTF2Q8N3S3 785 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 OR2A12Q8NGT7 310 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 BRSK1Q8TDC3 778 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 GANCQ8TET4 914 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 FRS2Q8WU20 508 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 SPOCK2Q92563 424 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 TADA1Q96BN2 335 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 SIGLEC10Q96LC7 697 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 FAM167BQ9BTA0 163 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 LRRC4CQ9HCJ2 640 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 C20orf96Q9NUD7 363 aaPredicted RBP10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 BCCIPQ9P287 314 aaKnown RBP eCLIP10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 CA14Q9ULX7 337 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 NDRG2Q9UN36 371 aaKnown RBP10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 STARD13Q9Y3M8 1113 aa10.33□□□□□ -0.76
PRPF38A-202ENST00000474048 C1orf232A0A0U1RR37 186 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 CCDC78A2IDD5 438 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 CAPN8A6NHC0 703 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 RASGRF2O14827 1237 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 RGS16O15492 202 aaPredicted RBP10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 NARSO43776 548 aaKnown RBP10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 KLF8O95600 359 aaPredicted RBP10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 ADH1BP00325 375 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 EGFP01133 1207 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 DNTTP04053 509 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 ATXN1LP0C7T5 689 aaKnown RBP10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 ACADMP11310 421 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 HOXB2P14652 356 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 CTPS1P17812 591 aa10.32□□□□□ -0.76
PRPF38A-202ENST00000474048 LPOP22079 712 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms