RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 GPR156Q8NFN8 814 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 OR6C4Q8NGE1 309 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 SCG3Q8WXD2 468 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 ARHGEF2Q92974 986 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 USP7Q93009 1102 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 TSACCQ96A04 125 aaPredicted RBP5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 TMEM159Q96B96 161 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 ARHGEF26Q96DR7 871 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 PDXPQ96GD0 296 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 CCDC34Q96HJ3 373 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 C1orf74Q96LT6 269 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 PSMG3-AS1Q96PY0 264 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 RBM15Q96T37 977 aaKnown RBP eCLIP5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 TBCBQ99426 244 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 CMKLR1Q99788 373 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 C1QTNF7Q9BXJ2 289 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 SLC12A9Q9BXP2 914 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 OSBPL1AQ9BXW6 950 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 EDEM3Q9BZQ6 932 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 SCAND2PQ9GZW5 306 aaPredicted RBP5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 LRRC4CQ9HCJ2 640 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 ATP13A1Q9HD20 1204 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 ATP13A2Q9NQ11 1180 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 APPL1Q9UKG1 709 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 GPR34Q9UPC5 381 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 DOLKQ9UPQ8 538 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 MAN2B2Q9Y2E5 1009 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 ZDHHC9Q9Y397 364 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 PCDHB11Q9Y5F2 797 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 RNF215Q9Y6U7 377 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 SDK2Q58EX2 2172 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 LRP4O75096 1905 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 DOPEY1Q5JWR5 2465 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 LRRK1Q38SD2 2015 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 STMND1H3BQB6 276 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 KRIT1O00522 736 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 SIAH2O43255 324 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 MMP20O60882 483 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 SRGAP2O75044 1071 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 TM7SF2O76062 418 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 RASGRP1O95267 797 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 SMC2O95347 1197 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 POP4O95707 220 aaKnown RBP5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 CCNYL3P0C7X3 344 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 CTSEP14091 401 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 PNLIPP16233 465 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 GLB1P16278 677 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 ITIH2P19823 946 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 CASRP41180 1078 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 ARSDP51689 593 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 MAPK10P53779 464 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 MARSP56192 900 aaKnown RBP5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 POLE2P56282 527 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 SRP54P61011 504 aaKnown RBP5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 SNRPD1P62314 119 aaKnown RBP5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 APBA1Q02410 837 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 DEUP1Q05D60 604 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 KCNAB2Q13303 367 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 STIM1Q13586 685 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 HLTFQ14527 1009 aaKnown RBP eCLIP5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 NFATC4Q14934 902 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 C16orf72Q14CZ0 275 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 LRRC14Q15048 493 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 IGFBP7Q16270 282 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 ARHGAP44Q17R89 818 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 WSCD2Q2TBF2 565 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 MYLK3Q32MK0 819 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 SLC25A52Q3SY17 297 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 ATXN7L2Q5T6C5 722 aaPredicted RBP5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 PHF19Q5T6S3 580 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 MANEALQ5VSG8 457 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 KLHL10Q6JEL2 608 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 BORAQ6PGQ7 559 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 TRIM65Q6PJ69 517 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 GDPD4Q6W3E5 623 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 BNIPLQ7Z465 357 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 TTC7BQ86TV6 843 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 NLRP14Q86W24 1093 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 GKN2Q86XP6 184 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 ZDHHC17Q8IUH5 632 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 SFTPA2Q8IWL1 248 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 DRC7Q8IY82 874 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 Q8N9G6 341 aaPredicted RBP5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 OR2AP1Q8NGE2 309 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 CXorf40AQ8TE69 158 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 JPH3Q8WXH2 748 aaPredicted RBP5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 SHC3Q92529 594 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 HPS1Q92902 700 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 SMARCE1Q969G3 411 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 PMEPA1Q969W9 287 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 DHTKD1Q96HY7 919 aaPredicted RBP5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 KLHL32Q96NJ5 620 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 HAPLN3Q96S86 360 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 CRACR2AQ9BSW2 395 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 WRAP53Q9BUR4 548 aaKnown RBP5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 ZYG11BQ9C0D3 744 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 B3GNT4Q9C0J1 378 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 GDPD2Q9HCC8 539 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 NDFIP2Q9NV92 336 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 KCNK4Q9NYG8 393 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms