RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 C5orf60A6NFR6 353 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 CES2O00748 559 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 BCAT2O15382 392 aaPredicted RBP20.91■□□□□ 0.94
TOP3A-204ENST00000472959 LIASO43766 372 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 MAT2AP31153 395 aaKnown RBP20.91■□□□□ 0.94
TOP3A-204ENST00000472959 STIP1P31948 543 aaKnown RBP20.91■□□□□ 0.94
TOP3A-204ENST00000472959 FAM193AP78312 1265 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 SPEM2Q0P670 501 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 CCNG2Q16589 344 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 SEL1L3Q68CR1 1132 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 DCLK2Q8N568 766 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 CXorf40AQ8TE69 158 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 PIH1D2Q8WWB5 315 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 ASB12Q8WXK4 309 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 ATG4AQ8WYN0 398 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 SPATA13Q96N96 652 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 FCRL5Q96RD9 977 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 OSBPL9Q96SU4 736 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 RBM15Q96T37 977 aaKnown RBP eCLIP20.91■□□□□ 0.94
TOP3A-204ENST00000472959 NAP1L3Q99457 506 aaPredicted RBP20.91■□□□□ 0.94
TOP3A-204ENST00000472959 ATXN2Q99700 1313 aaKnown RBP20.91■□□□□ 0.94
TOP3A-204ENST00000472959 C1QTNF2Q9BXJ5 285 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 ADGRE3Q9BY15 652 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 PCDH9Q9HC56 1237 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 HOMER3Q9NSC5 361 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 SEMA4GQ9NTN9 838 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 GGT7Q9UJ14 662 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 SNX12Q9UMY4 172 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 ZFR2Q9UPR6 939 aaKnown RBP20.91■□□□□ 0.94
TOP3A-204ENST00000472959 PPIL1Q9Y3C6 166 aa20.91■□□□□ 0.94
TOP3A-204ENST00000472959 KHNYNO15037 678 aaKnown RBP20.9■□□□□ 0.94
TOP3A-204ENST00000472959 OPHN1O60890 802 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 ITIH2P19823 946 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 NFKB1P19838 968 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 TGM1P22735 817 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 MMP12P39900 470 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 RACK1P63244 317 aaKnown RBP20.9■□□□□ 0.94
TOP3A-204ENST00000472959 SGCGQ13326 291 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 SIX1Q15475 284 aaPredicted RBP20.9■□□□□ 0.94
TOP3A-204ENST00000472959 HS1BP3Q53T59 392 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 ANKRD20A2Q5SQ80 823 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 ANKRD20A1Q5TYW2 823 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 ANKRD20A3Q5VUR7 823 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 NAPEPLDQ6IQ20 393 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 SLC23A3Q6PIS1 610 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 USP45Q70EL2 814 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 DPPA4Q7L190 304 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 ZCCHC9Q8N567 271 aaKnown RBP20.9■□□□□ 0.94
TOP3A-204ENST00000472959 FAM71DQ8N9W8 422 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 C1orf54Q8WWF1 131 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 SCRN2Q96FV2 425 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 SERAC1Q96JX3 654 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 PPP1R2P1Q96PQ5 205 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 MCCC1Q96RQ3 725 aaPredicted RBP20.9■□□□□ 0.94
TOP3A-204ENST00000472959 SLC17A9Q9BYT1 436 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 GBA3Q9H227 469 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 EBF2Q9HAK2 575 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 FAM153AQ9UHL3 310 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 RSPH14Q9UHP6 348 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 CHKBQ9Y259 395 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 MYO15AQ9UKN7 3530 aa20.9■□□□□ 0.94
TOP3A-204ENST00000472959 IGLON5A6NGN9 336 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 PRAMEF26H0Y7S4 382 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 GCATO75600 419 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 PRLP01236 227 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 PDHA1P08559 390 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 CYP2A6P11509 494 aaPredicted RBP20.89■□□□□ 0.93
TOP3A-204ENST00000472959 PRLRP16471 622 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 TCP1P17987 556 aaKnown RBP20.89■□□□□ 0.93
TOP3A-204ENST00000472959 AFF3P51826 1226 aaKnown RBP20.89■□□□□ 0.93
TOP3A-204ENST00000472959 EPHB1P54762 984 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 TEAD4Q15561 434 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 OASLQ15646 514 aaKnown RBP20.89■□□□□ 0.93
TOP3A-204ENST00000472959 CCDC6Q16204 474 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 TRIM61Q5EBN2 209 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 DRICH1Q6PGQ1 229 aaPredicted RBP20.89■□□□□ 0.93
TOP3A-204ENST00000472959 SPATA22Q8NHS9 363 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 WDR24Q96S15 920 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 TMEM121Q9BTD3 319 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 WRAP53Q9BUR4 548 aaKnown RBP20.89■□□□□ 0.93
TOP3A-204ENST00000472959 TM9SF3Q9HD45 589 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 PARD6AQ9NPB6 346 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 SLC6A14Q9UN76 642 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 ZNF148Q9UQR1 794 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 GON4LQ3T8J9 2241 aa20.89■□□□□ 0.93
TOP3A-204ENST00000472959 RIF1Q5UIP0 2472 aaKnown RBP20.88■□□□□ 0.93
TOP3A-204ENST00000472959 EP300Q09472 2414 aaPredicted RBP20.88■□□□□ 0.93
TOP3A-204ENST00000472959 SLC31A1O15431 190 aa20.88■□□□□ 0.93
TOP3A-204ENST00000472959 MMP20O60882 483 aa20.88■□□□□ 0.93
TOP3A-204ENST00000472959 ANXA9O76027 345 aa20.88■□□□□ 0.93
TOP3A-204ENST00000472959 TM7SF2O76062 418 aa20.88■□□□□ 0.93
TOP3A-204ENST00000472959 EPOP01588 193 aa20.88■□□□□ 0.93
TOP3A-204ENST00000472959 PRKCGP05129 697 aa20.88■□□□□ 0.93
TOP3A-204ENST00000472959 CFIP05156 583 aa20.88■□□□□ 0.93
TOP3A-204ENST00000472959 ITGAVP06756 1048 aa20.88■□□□□ 0.93
TOP3A-204ENST00000472959 HNRNPA2B1P22626 353 aaKnown RBP20.88■□□□□ 0.93
TOP3A-204ENST00000472959 AKT2P31751 481 aa20.88■□□□□ 0.93
TOP3A-204ENST00000472959 GRIA4P48058 902 aa20.88■□□□□ 0.93
TOP3A-204ENST00000472959 LIG3P49916 1009 aa20.88■□□□□ 0.93
TOP3A-204ENST00000472959 CDK18Q07002 472 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms