RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 DPYSL3Q14195 570 aa19.57■□□□□ 0.72
COMMD1-208ENST00000472729 SPA17Q15506 151 aa19.57■□□□□ 0.72
COMMD1-208ENST00000472729 RALGPS1Q5JS13 557 aa19.57■□□□□ 0.72
COMMD1-208ENST00000472729 CCNYQ8ND76 341 aa19.57■□□□□ 0.72
COMMD1-208ENST00000472729 OR4C6Q8NH72 309 aa19.57■□□□□ 0.72
COMMD1-208ENST00000472729 LMX1AQ8TE12 382 aa19.57■□□□□ 0.72
COMMD1-208ENST00000472729 TSC1Q92574 1164 aa19.57■□□□□ 0.72
COMMD1-208ENST00000472729 NUDCD1Q96RS6 583 aa19.57■□□□□ 0.72
COMMD1-208ENST00000472729 IL12RB2Q99665 862 aa19.57■□□□□ 0.72
COMMD1-208ENST00000472729 NCKIPSDQ9NZQ3 722 aa19.57■□□□□ 0.72
COMMD1-208ENST00000472729 DOLKQ9UPQ8 538 aa19.57■□□□□ 0.72
COMMD1-208ENST00000472729 COQ6Q9Y2Z9 468 aa19.57■□□□□ 0.72
COMMD1-208ENST00000472729 KNL1Q8NG31 2342 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 LRRD1A4D1F6 860 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 CFAP69A5D8W1 941 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 TRIM38O00635 465 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 SCAMP1O15126 338 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 AQP9O43315 295 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 SOCS5O75159 536 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 DKK1O94907 266 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 MMP12P39900 470 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 NOP2P46087 812 aaKnown RBP19.56■□□□□ 0.72
COMMD1-208ENST00000472729 E2F1Q01094 437 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 PPARDQ03181 441 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 ACOX1Q15067 660 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 IRF4Q15306 451 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 SMAD1Q15797 465 aaKnown RBP19.56■□□□□ 0.72
COMMD1-208ENST00000472729 IFI16Q16666 785 aaKnown RBP19.56■□□□□ 0.72
COMMD1-208ENST00000472729 ATP13A4Q4VNC1 1196 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 SARM1Q6SZW1 724 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 KDF1Q8NAX2 398 aaPredicted RBP19.56■□□□□ 0.72
COMMD1-208ENST00000472729 SCG3Q8WXD2 468 aaKnown RBP19.56■□□□□ 0.72
COMMD1-208ENST00000472729 RFFLQ8WZ73 363 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 GLMNQ92990 594 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 VOPP1Q96AW1 172 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 POLR1EQ9GZS1 481 aaKnown RBP19.56■□□□□ 0.72
COMMD1-208ENST00000472729 ABCG4Q9H172 646 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 CCDC86Q9H6F5 360 aaKnown RBP19.56■□□□□ 0.72
COMMD1-208ENST00000472729 NT5MQ9NPB1 228 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 MBNL1Q9NR56 388 aaKnown RBP19.56■□□□□ 0.72
COMMD1-208ENST00000472729 APOBEC3BQ9UH17 382 aaKnown RBP19.56■□□□□ 0.72
COMMD1-208ENST00000472729 PCDHGC4Q9Y5F7 938 aa19.56■□□□□ 0.72
COMMD1-208ENST00000472729 PCNX2A6NKB5 2137 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 A8MX80 341 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 MUSKO15146 869 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 IPO7O95373 1038 aaKnown RBP19.55■□□□□ 0.72
COMMD1-208ENST00000472729 CPP00450 1065 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 PCCBP05166 539 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 CYP2A6P11509 494 aaPredicted RBP19.55■□□□□ 0.72
COMMD1-208ENST00000472729 TNNT1P13805 278 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 CTSEP14091 401 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 CA4P22748 312 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 CES1P23141 567 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 IL4RP24394 825 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 IGFALSP35858 605 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 GARSP41250 739 aaKnown RBP19.55■□□□□ 0.72
COMMD1-208ENST00000472729 SLC1A1P43005 524 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 ACADVLP49748 655 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 PEX5P50542 639 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 TAS2R40P59535 323 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 MAXP61244 160 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 SEMG2Q02383 582 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 INPP5AQ14642 412 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 PAFAH1B3Q15102 231 aaKnown RBP19.55■□□□□ 0.72
COMMD1-208ENST00000472729 MACC1Q6ZN28 852 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 KANSL1Q7Z3B3 1105 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 TP53I13Q8NBR0 393 aaPredicted RBP19.55■□□□□ 0.72
COMMD1-208ENST00000472729 ZNF548Q8NEK5 533 aaPredicted RBP19.55■□□□□ 0.72
COMMD1-208ENST00000472729 FAM71BQ8TC56 605 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 ECHDC3Q96DC8 303 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 MGME1Q9BQP7 344 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 USP29Q9HBJ7 922 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 NOD2Q9HC29 1040 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 INTUQ9ULD6 942 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 ZMIZ1Q9ULJ6 1067 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 CSNK1G3Q9Y6M4 447 aa19.55■□□□□ 0.72
COMMD1-208ENST00000472729 TTC24A2A3L6 582 aaPredicted RBP19.54■□□□□ 0.72
COMMD1-208ENST00000472729 FAM149AA5PLN7 773 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 CACNB4O00305 520 aaPredicted RBP19.54■□□□□ 0.72
COMMD1-208ENST00000472729 MATN3O15232 486 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 SPOPO43791 374 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 MFSD11O43934 449 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 ANXA6P08133 673 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 RPIAP49247 311 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 EPHB1P54762 984 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 GALNT2Q10471 571 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 ARHGEF7Q14155 803 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 WSCD2Q2TBF2 565 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 PROX2Q3B8N5 592 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 PRRT3Q5FWE3 981 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 ARMC12Q5T9G4 340 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 NCBP2-AS2Q69YL0 99 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 USP45Q70EL2 814 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 PHACTR4Q8IZ21 702 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 PCDH19Q8TAB3 1148 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 GPR27Q9NS67 375 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 RBM22Q9NW64 420 aaKnown RBP eCLIP19.54■□□□□ 0.72
COMMD1-208ENST00000472729 KCTD5Q9NXV2 234 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 PHTF1Q9UMS5 762 aa19.54■□□□□ 0.72
COMMD1-208ENST00000472729 K7ESM1 405 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms