RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 NKX2-8O15522 239 aa19.16■□□□□ 0.66
SORT1-203ENST00000471996 MTSS1O43312 755 aa19.16■□□□□ 0.66
SORT1-203ENST00000471996 USP8P40818 1118 aa19.16■□□□□ 0.66
SORT1-203ENST00000471996 SLC25A52Q3SY17 297 aa19.16■□□□□ 0.66
SORT1-203ENST00000471996 SPECC1LQ69YQ0 1117 aa19.16■□□□□ 0.66
SORT1-203ENST00000471996 OR1E3Q8WZA6 343 aa19.16■□□□□ 0.66
SORT1-203ENST00000471996 NUDT22Q9BRQ3 303 aa19.16■□□□□ 0.66
SORT1-203ENST00000471996 DDA1Q9BW61 102 aa19.16■□□□□ 0.66
SORT1-203ENST00000471996 SYNCQ9H7C4 482 aa19.16■□□□□ 0.66
SORT1-203ENST00000471996 NDFIP2Q9NV92 336 aa19.16■□□□□ 0.66
SORT1-203ENST00000471996 PSMA7O14818 248 aa19.15■□□□□ 0.66
SORT1-203ENST00000471996 RAD1O60671 282 aa19.15■□□□□ 0.66
SORT1-203ENST00000471996 SUOXP51687 545 aa19.15■□□□□ 0.66
SORT1-203ENST00000471996 OR1D5P58170 312 aa19.15■□□□□ 0.66
SORT1-203ENST00000471996 RAD51Q06609 339 aa19.15■□□□□ 0.66
SORT1-203ENST00000471996 ELP6Q0PNE2 266 aa19.15■□□□□ 0.66
SORT1-203ENST00000471996 MTM1Q13496 603 aa19.15■□□□□ 0.66
SORT1-203ENST00000471996 AGERQ15109 404 aa19.15■□□□□ 0.66
SORT1-203ENST00000471996 ARHGAP44Q17R89 818 aa19.15■□□□□ 0.66
SORT1-203ENST00000471996 LACTB2Q53H82 288 aaPredicted RBP19.15■□□□□ 0.66
SORT1-203ENST00000471996 LEKR1Q6ZMV7 388 aa19.15■□□□□ 0.66
SORT1-203ENST00000471996 TRIM59Q8IWR1 403 aa19.15■□□□□ 0.66
SORT1-203ENST00000471996 CCDC112Q8NEF3 446 aa19.15■□□□□ 0.66
SORT1-203ENST00000471996 SPATA20Q8TB22 786 aa19.15■□□□□ 0.66
SORT1-203ENST00000471996 DHTKD1Q96HY7 919 aaPredicted RBP19.15■□□□□ 0.66
SORT1-203ENST00000471996 CCDC74BQ96LY2 380 aa19.15■□□□□ 0.66
SORT1-203ENST00000471996 GDAP1L1Q96MZ0 367 aa19.15■□□□□ 0.66
SORT1-203ENST00000471996 HPCAL4Q9UM19 191 aa19.15■□□□□ 0.66
SORT1-203ENST00000471996 TMEM202A6NGA9 273 aa19.14■□□□□ 0.65
SORT1-203ENST00000471996 PRR19A6NJB7 356 aa19.14■□□□□ 0.65
SORT1-203ENST00000471996 PCCBP05166 539 aa19.14■□□□□ 0.65
SORT1-203ENST00000471996 ALDH4A1P30038 563 aa19.14■□□□□ 0.65
SORT1-203ENST00000471996 KLRB1Q12918 225 aa19.14■□□□□ 0.65
SORT1-203ENST00000471996 TRA2AQ13595 282 aaKnown RBP eCLIP19.14■□□□□ 0.65
SORT1-203ENST00000471996 NR1D2Q14995 579 aa19.14■□□□□ 0.65
SORT1-203ENST00000471996 FOXR2Q6PJQ5 311 aa19.14■□□□□ 0.65
SORT1-203ENST00000471996 ZNF438Q7Z4V0 828 aa19.14■□□□□ 0.65
SORT1-203ENST00000471996 OR56A4Q8NGH8 313 aa19.14■□□□□ 0.65
SORT1-203ENST00000471996 KIAA1524Q8TCG1 905 aa19.14■□□□□ 0.65
SORT1-203ENST00000471996 APOBEC4Q8WW27 367 aaKnown RBP19.14■□□□□ 0.65
SORT1-203ENST00000471996 ART4Q93070 314 aa19.14■□□□□ 0.65
SORT1-203ENST00000471996 FAM81BQ96LP2 452 aa19.14■□□□□ 0.65
SORT1-203ENST00000471996 TTYH3Q9C0H2 523 aa19.14■□□□□ 0.65
SORT1-203ENST00000471996 TMEM168Q9H0V1 697 aa19.14■□□□□ 0.65
SORT1-203ENST00000471996 FGF22Q9HCT0 170 aa19.14■□□□□ 0.65
SORT1-203ENST00000471996 MRPL40Q9NQ50 206 aaKnown RBP19.14■□□□□ 0.65
SORT1-203ENST00000471996 MFHAS1Q9Y4C4 1052 aa19.14■□□□□ 0.65
SORT1-203ENST00000471996 SPTBN1Q01082 2364 aaKnown RBP19.13■□□□□ 0.65
SORT1-203ENST00000471996 CREBBPQ92793 2442 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 DUX1O43812 170 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 HSP90AA1P07900 732 aaKnown RBP19.13■□□□□ 0.65
SORT1-203ENST00000471996 PRKAR1AP10644 381 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 XPAP23025 273 aaPredicted RBP19.13■□□□□ 0.65
SORT1-203ENST00000471996 CD1CP29017 333 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 LIMK2P53671 638 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 KIAA1024LP59773 190 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 CDC20Q12834 499 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 STIM1Q13586 685 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 GJB7Q6PEY0 223 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 C17orf82Q86X59 251 aaPredicted RBP19.13■□□□□ 0.65
SORT1-203ENST00000471996 AGBL5Q8NDL9 886 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 CCL4L1Q8NHW4 92 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 SNX21Q969T3 373 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 HMCESQ96FZ2 354 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 ASPSCR1Q9BZE9 553 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 MAGEH1Q9H213 219 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 SLC39A1Q9NY26 324 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 DAAM1Q9Y4D1 1078 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 LRRK1Q38SD2 2015 aa19.13■□□□□ 0.65
SORT1-203ENST00000471996 ICE1Q9Y2F5 2266 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 LRP4O75096 1905 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 RHPN2P1A8MT19 583 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 CACNB4O00305 520 aaPredicted RBP19.12■□□□□ 0.65
SORT1-203ENST00000471996 TNFRSF10CO14798 259 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 ZW10O43264 779 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 TMCC1O94876 653 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 SMC2O95347 1197 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 IGSF6O95976 241 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 MAPKAPK2P49137 400 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 MAZP56270 477 aaKnown RBP19.12■□□□□ 0.65
SORT1-203ENST00000471996 TTI2Q6NXR4 508 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 BNIPLQ7Z465 357 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 NLRP14Q86W24 1093 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 FAM131BQ86XD5 332 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 PLA2G15Q8NCC3 412 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 HCAR2Q8TDS4 363 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 FUBP1Q96AE4 644 aaKnown RBP19.12■□□□□ 0.65
SORT1-203ENST00000471996 RETREG1Q9H6L5 497 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 GPN2Q9H9Y4 310 aaPredicted RBP19.12■□□□□ 0.65
SORT1-203ENST00000471996 DNAI1Q9UI46 699 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 PILRAQ9UKJ1 303 aa19.12■□□□□ 0.65
SORT1-203ENST00000471996 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.12■□□□□ 0.65
SORT1-203ENST00000471996 ZSCAN5CA6NGD5 496 aaPredicted RBP19.11■□□□□ 0.65
SORT1-203ENST00000471996 KDELR3O43731 214 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 AGFG2O95081 481 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 KRT7P08729 469 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 CD44P16070 742 aaKnown RBP19.11■□□□□ 0.65
SORT1-203ENST00000471996 RHOQP17081 205 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 KELP23276 732 aa19.11■□□□□ 0.65
SORT1-203ENST00000471996 CSTF2P33240 577 aaKnown RBP eCLIP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms