RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 VPS13AQ96RL7 3174 aa15.22■□□□□ 0.03
SNX13-205ENST00000471744 ATXN2Q99700 1313 aaKnown RBP15.21■□□□□ 0.03
SNX13-205ENST00000471744 TTC24A2A3L6 582 aaPredicted RBP15.21■□□□□ 0.03
SNX13-205ENST00000471744 PRAMEF26H0Y7S4 382 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 CFIP05156 583 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 CYP2A6P11509 494 aaPredicted RBP15.21■□□□□ 0.03
SNX13-205ENST00000471744 AKT2P31751 481 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 MMP12P39900 470 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 CD86P42081 329 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 GRIA4P48058 902 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 AFF3P51826 1226 aaKnown RBP15.21■□□□□ 0.03
SNX13-205ENST00000471744 EPHB1P54762 984 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 NIPAL4Q0D2K0 466 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 SGCGQ13326 291 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 ZNF284Q2VY69 593 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 TRIM61Q5EBN2 209 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 NAPEPLDQ6IQ20 393 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 USP45Q70EL2 814 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 B4GALNT4Q76KP1 1039 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 PID1Q7Z2X4 250 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 ALYREFQ86V81 257 aaKnown RBP15.21■□□□□ 0.03
SNX13-205ENST00000471744 ZSWIM9Q86XI8 627 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 ZCCHC9Q8N567 271 aaKnown RBP15.21■□□□□ 0.03
SNX13-205ENST00000471744 DCLK2Q8N568 766 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 C1orf216Q8TAB5 229 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 SLC35B2Q8TB61 432 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 FAM174AQ8TBP5 190 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 SERAC1Q96JX3 654 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 NSMCE3Q96MG7 304 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 NAP1L3Q99457 506 aaPredicted RBP15.21■□□□□ 0.03
SNX13-205ENST00000471744 CEP41Q9BYV8 373 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 ZDHHC5Q9C0B5 715 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 HOMER3Q9NSC5 361 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 ZFR2Q9UPR6 939 aaKnown RBP15.21■□□□□ 0.03
SNX13-205ENST00000471744 PPIL1Q9Y3C6 166 aa15.21■□□□□ 0.03
SNX13-205ENST00000471744 TP53BP1Q12888 1972 aaPredicted RBP15.21■□□□□ 0.03
SNX13-205ENST00000471744 USP27XA6NNY8 438 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 ENC1O14682 589 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 KCNN4O15554 427 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 SPINT1O43278 529 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 CEP104O60308 925 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 FZD6O60353 706 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 MAGEC1O60732 1142 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 OPHN1O60890 802 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 TM7SF2O76062 418 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 FGGP02679 453 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 SYPP08247 313 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 HNRNPA2B1P22626 353 aaKnown RBP15.2■□□□□ 0.02
SNX13-205ENST00000471744 TGM1P22735 817 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 MAT2AP31153 395 aaKnown RBP15.2■□□□□ 0.02
SNX13-205ENST00000471744 STIP1P31948 543 aaKnown RBP15.2■□□□□ 0.02
SNX13-205ENST00000471744 TNNT3P45378 269 aaPredicted RBP15.2■□□□□ 0.02
SNX13-205ENST00000471744 FAM193AP78312 1265 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 SKOR1P84550 965 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 LMNB2Q03252 620 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 OVGP1Q12889 678 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 PRR23CQ6ZRP0 262 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 DPPA4Q7L190 304 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 IQCHQ86VS3 1027 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 ZNF567Q8N184 647 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNX13-205ENST00000471744 DENND6BQ8NEG7 585 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 SCRN2Q96FV2 425 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 FCRL5Q96RD9 977 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 ORAI3Q9BRQ5 295 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 C1QTNF2Q9BXJ5 285 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 ADGRE3Q9BY15 652 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 SLC17A9Q9BYT1 436 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 PCDH9Q9HC56 1237 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 CAPN10Q9HC96 672 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 TM9SF3Q9HD45 589 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 PARD6AQ9NPB6 346 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 KCTD5Q9NXV2 234 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 FAM153AQ9UHL3 310 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 ITM2BQ9Y287 266 aa15.2■□□□□ 0.02
SNX13-205ENST00000471744 ADAMTS9Q9P2N4 1935 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 PCDH15Q96QU1 1955 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 TCRBV7S2A1N4TA0A589 114 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 CES2O00748 559 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 SLC31A1O15431 190 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 ANXA9O76027 345 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 MMP2P08253 660 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 VIPR1P32241 457 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 CD68P34810 354 aaPredicted RBP15.19■□□□□ 0.02
SNX13-205ENST00000471744 GNG11P61952 73 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 STAT4Q14765 748 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 LRRC73Q5JTD7 316 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 SEL1L3Q68CR1 1132 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 CCDC70Q6NSX1 233 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 DRICH1Q6PGQ1 229 aaPredicted RBP15.19■□□□□ 0.02
SNX13-205ENST00000471744 ADAT2Q7Z6V5 191 aaKnown RBP15.19■□□□□ 0.02
SNX13-205ENST00000471744 PIH1D2Q8WWB5 315 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 TADA1Q96BN2 335 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 SPATA13Q96N96 652 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 LENG8Q96PV6 779 aaPredicted RBP15.19■□□□□ 0.02
SNX13-205ENST00000471744 MCCC1Q96RQ3 725 aaPredicted RBP15.19■□□□□ 0.02
SNX13-205ENST00000471744 RBM15Q96T37 977 aaKnown RBP eCLIP15.19■□□□□ 0.024e-7■■□□□ 11.6
SNX13-205ENST00000471744 FAM118BQ9BPY3 351 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 GBA3Q9H227 469 aa15.19■□□□□ 0.02
SNX13-205ENST00000471744 EBF2Q9HAK2 575 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms