RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 MYLKQ15746 1914 aa19.9■□□□□ 0.78
HDAC7-220ENST00000471235 ASCC3Q8N3C0 2202 aaKnown RBP19.9■□□□□ 0.78
HDAC7-220ENST00000471235 TCRBV7S2A1N4TA0A589 114 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 RIOK3O14730 519 aaKnown RBP19.89■□□□□ 0.77
HDAC7-220ENST00000471235 MTSS1O43312 755 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 GDF9O60383 454 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 TDRD6O60522 2096 aaKnown RBP19.89■□□□□ 0.77
HDAC7-220ENST00000471235 PGLSO95336 258 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 ENGP17813 658 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 CES1P23141 567 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 GRIA4P48058 902 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 AFF3P51826 1226 aaKnown RBP19.89■□□□□ 0.77
HDAC7-220ENST00000471235 EIF3EP60228 445 aaKnown RBP19.89■□□□□ 0.77
HDAC7-220ENST00000471235 RACK1P63244 317 aaKnown RBP19.89■□□□□ 0.77
HDAC7-220ENST00000471235 BNC1Q01954 994 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 SEMG2Q02383 582 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 TMEM52BQ4KMG9 183 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 ERAP2Q6P179 960 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 ZSCAN30Q86W11 494 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 CDKL3Q8IVW4 592 aaPredicted RBP19.89■□□□□ 0.77
HDAC7-220ENST00000471235 MYOCQ99972 504 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 WRAP53Q9BUR4 548 aaKnown RBP19.89■□□□□ 0.77
HDAC7-220ENST00000471235 TLR10Q9BXR5 811 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 TDRD1Q9BXT4 1180 aaKnown RBP19.89■□□□□ 0.77
HDAC7-220ENST00000471235 C10orf88Q9H8K7 445 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 FZD3Q9NPG1 666 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 PYCARDQ9ULZ3 195 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 PCDHB9Q9Y5E1 797 aa19.89■□□□□ 0.77
HDAC7-220ENST00000471235 A0A1W2PQ67 120 aa19.88■□□□□ 0.77
HDAC7-220ENST00000471235 A0A1W2PR77 199 aa19.88■□□□□ 0.77
HDAC7-220ENST00000471235 IGLON5A6NGN9 336 aa19.88■□□□□ 0.77
HDAC7-220ENST00000471235 SLC31A1O15431 190 aa19.88■□□□□ 0.77
HDAC7-220ENST00000471235 CD86P42081 329 aa19.88■□□□□ 0.77
HDAC7-220ENST00000471235 CSNK1EP49674 416 aaKnown RBP19.88■□□□□ 0.77
HDAC7-220ENST00000471235 SKOR1P84550 965 aa19.88■□□□□ 0.77
HDAC7-220ENST00000471235 RALGDSQ12967 914 aa19.88■□□□□ 0.77
HDAC7-220ENST00000471235 GRIK2Q13002 908 aa19.88■□□□□ 0.77
HDAC7-220ENST00000471235 TEX44Q53QW1 395 aa19.88■□□□□ 0.77
HDAC7-220ENST00000471235 ARMC12Q5T9G4 340 aa19.88■□□□□ 0.77
HDAC7-220ENST00000471235 CXorf40AQ8TE69 158 aa19.88■□□□□ 0.77
HDAC7-220ENST00000471235 HTR3CQ8WXA8 447 aa19.88■□□□□ 0.77
HDAC7-220ENST00000471235 IMP4Q96G21 291 aaKnown RBP19.88■□□□□ 0.77
HDAC7-220ENST00000471235 CARD9Q9H257 536 aa19.88■□□□□ 0.77
HDAC7-220ENST00000471235 GLOD4Q9HC38 313 aa19.88■□□□□ 0.77
HDAC7-220ENST00000471235 AASDHPPTQ9NRN7 309 aa19.88■□□□□ 0.77
HDAC7-220ENST00000471235 TRMT1Q9NXH9 659 aaKnown RBP19.88■□□□□ 0.77
HDAC7-220ENST00000471235 CA5BQ9Y2D0 317 aa19.88■□□□□ 0.77
HDAC7-220ENST00000471235 R3HDM2Q9Y2K5 976 aaKnown RBP19.88■□□□□ 0.77
HDAC7-220ENST00000471235 DMXL1Q9Y485 3027 aa19.88■□□□□ 0.77
HDAC7-220ENST00000471235 KNL1Q8NG31 2342 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 CFAP54Q96N23 3096 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 A0A1B0GVT2 93 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 GOLGA6L9A6NEM1 432 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 USP27XA6NNY8 438 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 PRAMEF26H0Y7S4 382 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 KCNK3O14649 394 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 FZD6O60353 706 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 MMP20O60882 483 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 WNT1P04628 370 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 PDHA1P08559 390 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 RBP3P10745 1247 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 HNRNPA2B1P22626 353 aaKnown RBP19.87■□□□□ 0.77
HDAC7-220ENST00000471235 RBL1P28749 1068 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 POLR2LP62875 67 aaKnown RBP19.87■□□□□ 0.77
HDAC7-220ENST00000471235 TEAD4Q15561 434 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 DPPA4Q7L190 304 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 ZNF567Q8N184 647 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 TTC13Q8NBP0 860 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 TMEM145Q8NBT3 493 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 TEKT5Q96M29 485 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 C1QTNF2Q9BXJ5 285 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 SLC17A9Q9BYT1 436 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 SLC25A51Q9H1U9 297 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 KLHL8Q9P2G9 620 aaPredicted RBP19.87■□□□□ 0.77
HDAC7-220ENST00000471235 B4GALT6Q9UBX8 382 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 CEP250Q9BV73 2442 aa19.87■□□□□ 0.77
HDAC7-220ENST00000471235 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.86■□□□□ 0.77
HDAC7-220ENST00000471235 ARHGAP33O14559 1287 aa19.86■□□□□ 0.77
HDAC7-220ENST00000471235 CA4P22748 312 aa19.86■□□□□ 0.77
HDAC7-220ENST00000471235 CD68P34810 354 aaPredicted RBP19.86■□□□□ 0.77
HDAC7-220ENST00000471235 FAM193AP78312 1265 aa19.86■□□□□ 0.77
HDAC7-220ENST00000471235 GCNT7Q6ZNI0 430 aa19.86■□□□□ 0.77
HDAC7-220ENST00000471235 ADAT2Q7Z6V5 191 aaKnown RBP19.86■□□□□ 0.77
HDAC7-220ENST00000471235 SLC13A5Q86YT5 568 aaPredicted RBP19.86■□□□□ 0.77
HDAC7-220ENST00000471235 PIH1D2Q8WWB5 315 aa19.86■□□□□ 0.77
HDAC7-220ENST00000471235 TADA1Q96BN2 335 aa19.86■□□□□ 0.77
HDAC7-220ENST00000471235 RBM15Q96T37 977 aaKnown RBP eCLIP19.86■□□□□ 0.77
HDAC7-220ENST00000471235 VAT1Q99536 393 aa19.86■□□□□ 0.77
HDAC7-220ENST00000471235 PHTF1Q9UMS5 762 aa19.86■□□□□ 0.77
HDAC7-220ENST00000471235 CHKBQ9Y259 395 aa19.86■□□□□ 0.77
HDAC7-220ENST00000471235 VILLO15195 856 aa19.85■□□□□ 0.77
HDAC7-220ENST00000471235 RAD51BO15315 384 aa19.85■□□□□ 0.77
HDAC7-220ENST00000471235 TM7SF2O76062 418 aa19.85■□□□□ 0.77
HDAC7-220ENST00000471235 PAK4O96013 591 aaPredicted RBP19.85■□□□□ 0.77
HDAC7-220ENST00000471235 PRLP01236 227 aa19.85■□□□□ 0.77
HDAC7-220ENST00000471235 SYPP08247 313 aa19.85■□□□□ 0.77
HDAC7-220ENST00000471235 C6P13671 934 aa19.85■□□□□ 0.77
HDAC7-220ENST00000471235 NFKB1P19838 968 aa19.85■□□□□ 0.77
HDAC7-220ENST00000471235 CD38P28907 300 aa19.85■□□□□ 0.77
HDAC7-220ENST00000471235 AKT2P31751 481 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms