RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 BBS7Q8IWZ6 715 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 CFAP52Q8N1V2 620 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 MCUQ8NE86 351 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 FIBINQ8TAL6 211 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 ITFG1Q8TB96 612 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 BPIFB1Q8TDL5 484 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 AENQ8WTP8 325 aaKnown RBP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 ING5Q8WYH8 240 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 MAML1Q92585 1016 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 FGF13Q92913 245 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 CAVIN3Q969G5 261 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 CELF6Q96J87 481 aaKnown RBP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 TEKT5Q96M29 485 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 PRICKLE1Q96MT3 831 aaPredicted RBP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 UBL7Q96S82 380 aaPredicted RBP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 IL12RB2Q99665 862 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 ZFP14Q9HCL3 533 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 XAB2Q9HCS7 855 aaKnown RBP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 ZDHHC18Q9NUE0 388 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 GRHL1Q9NZI5 618 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 KIAA1522Q9P206 1035 aaPredicted RBP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 IGSF9Q9P2J2 1179 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 ZNF212Q9UDV6 495 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 NFU1Q9UMS0 254 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 AAR2Q9Y312 384 aaKnown RBP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 MFHAS1Q9Y4C4 1052 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 ANKRD36A6QL64 1941 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 MAP1BP46821 2468 aaKnown RBP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 KDELR3O43731 214 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 TSPAN3O60637 253 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 PRAMEF11O60813 436 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 PRAMEF12O95522 483 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 PENKP01210 267 aaPredicted RBP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 LMNAP02545 664 aaKnown RBP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 MLNP12872 115 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 VAV1P15498 845 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 PTPN3P26045 913 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 HOXD9P28356 352 aaPredicted RBP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 LMAN1P49257 510 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 PLK1P53350 603 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 GEMP55040 296 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 ARL4CP56559 192 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 MRPS25P82663 173 aaKnown RBP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 ZXDBP98169 803 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 SULT2A1Q06520 285 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 WASHC5Q12768 1159 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 SEMA5AQ13591 1074 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 ZNF235Q14590 738 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 PUM1Q14671 1186 aaKnown RBP eCLIP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 TRIP13Q15645 432 aaPredicted RBP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 SLC14A2Q15849 920 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 INO80DQ53TQ3 878 aaPredicted RBP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 RALGPS1Q5JS13 557 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 FAM78AQ5JUQ0 283 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 ARTNQ5T4W7 220 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 CFAP58Q5T655 872 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 RNASEH2BQ5TBB1 312 aaKnown RBP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 ARMC3Q5W041 872 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 RNF43Q68DV7 783 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 RETSATQ6NUM9 610 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 FBXO38Q6PIJ6 1188 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 CENPUQ71F23 418 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 TRMT10CQ7L0Y3 403 aaKnown RBP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 OTOP3Q7RTS5 596 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 HDXQ7Z353 690 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 MTERF4Q7Z6M4 381 aaKnown RBP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 CROCCP2Q86T23 111 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 LINC00523Q86TU6 105 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 RELL1Q8IUW5 271 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 YAF2Q8IY57 180 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 CNPY4Q8N129 248 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 PDIK1LQ8N165 341 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 ZNF567Q8N184 647 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 CARNMT1Q8N4J0 409 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 MREGQ8N565 214 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 ZCCHC9Q8N567 271 aaKnown RBP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 DCAF4L2Q8NA75 395 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 DTWD2Q8NBA8 298 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 CCDC110Q8TBZ0 833 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 FBXO25Q8TCJ0 367 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 DEPDC1BQ8WUY9 529 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 OSCP1Q8WVF1 389 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 ARHGEF2Q92974 986 aaKnown RBP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 ATP2A3Q93084 1043 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 ELSPBP1Q96BH3 223 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 LRRC39Q96DD0 335 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 HMCESQ96FZ2 354 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 ZSWIM3Q96MP5 696 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 XPO6Q96QU8 1125 aaKnown RBP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 SPON2Q9BUD6 331 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 BBS2Q9BXC9 721 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 ACE2Q9BYF1 805 aaPredicted RBP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 GBA3Q9H227 469 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 EPC1Q9H2F5 836 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 SOX17Q9H6I2 414 aaPredicted RBP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 NOL6Q9H6R4 1146 aaKnown RBP6.73□□□□□ -1.33
VAMP3-202ENST00000470357 ATP13A1Q9HD20 1204 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 SPHK2Q9NRA0 654 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 VPS45Q9NRW7 570 aa6.73□□□□□ -1.33
VAMP3-202ENST00000470357 DUS2Q9NX74 493 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms