RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 KAT5Q92993 513 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 RTP4Q96DX8 246 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 KLHL32Q96NJ5 620 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 NT5C1BQ96P26 610 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 WRAP53Q9BUR4 548 aaKnown RBP12.1□□□□□ -0.47
LSM2-209ENST00000470083 ASNSD1Q9NWL6 643 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 DONSONQ9NYP3 566 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 MPP6Q9NZW5 540 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 PCDHA7Q9UN72 937 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 IGLV3-10A0A075B6K4 115 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 RFPL1O75677 317 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 POP4O95707 220 aaKnown RBP12.09□□□□□ -0.47
LSM2-209ENST00000470083 GSRP00390 522 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 GPR3P46089 330 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 ME1P48163 572 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 MAZP56270 477 aaKnown RBP12.09□□□□□ -0.47
LSM2-209ENST00000470083 PDCLQ13371 301 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 C8orf34Q49A92 452 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 FOXR2Q6PJQ5 311 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 LRRC31Q6UY01 552 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 TIPARPQ7Z3E1 657 aaKnown RBP12.09□□□□□ -0.47
LSM2-209ENST00000470083 NRSN1Q8IZ57 195 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 OR2AP1Q8NGE2 309 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 OR56A4Q8NGH8 313 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 CCDC47Q96A33 483 aaKnown RBP12.09□□□□□ -0.47
LSM2-209ENST00000470083 MOCOSQ96EN8 888 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 DPYSL5Q9BPU6 564 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 TKTL2Q9H0I9 626 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 TMEM168Q9H0V1 697 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 TRIT1Q9H3H1 467 aaKnown RBP12.09□□□□□ -0.47
LSM2-209ENST00000470083 FGF22Q9HCT0 170 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 ANLNQ9NQW6 1124 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 OCIAD1Q9NX40 245 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 ARHGEF38Q9NXL2 777 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 ZNF212Q9UDV6 495 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 MAP4K5Q9Y4K4 846 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 ACTL7AQ9Y615 435 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 NF1P21359 2839 aa12.09□□□□□ -0.47
LSM2-209ENST00000470083 I6L893 689 aaPredicted RBP12.08□□□□□ -0.48
LSM2-209ENST00000470083 SLC16A3O15427 465 aaKnown RBP12.08□□□□□ -0.48
LSM2-209ENST00000470083 LDLRP01130 860 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 PDGFAP04085 211 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 ITIH2P19823 946 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 GRNP28799 593 aaKnown RBP12.08□□□□□ -0.48
LSM2-209ENST00000470083 CSF2RBP32927 897 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 MAN1A1P33908 653 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 KIAA1024LP59773 190 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 SNRPD1P62314 119 aaKnown RBP12.08□□□□□ -0.48
LSM2-209ENST00000470083 GNA12Q03113 381 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 MTM1Q13496 603 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 SQSTM1Q13501 440 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 POLD3Q15054 466 aaPredicted RBP12.08□□□□□ -0.48
LSM2-209ENST00000470083 MYLK3Q32MK0 819 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 KRTAP21-3Q3LHN1 58 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 TMEM52BQ4KMG9 183 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 EFHC1Q5JVL4 640 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 BRMS1LQ5PSV4 323 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 ARTNQ5T4W7 220 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 ACBD5Q5T8D3 534 aaPredicted RBP12.08□□□□□ -0.48
LSM2-209ENST00000470083 GDPD4Q6W3E5 623 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 KDELC2Q7Z4H8 507 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 CCL4L1Q8NHW4 92 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 ARHGEF2Q92974 986 aaKnown RBP12.08□□□□□ -0.48
LSM2-209ENST00000470083 SLC35C1Q96A29 364 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 C1orf74Q96LT6 269 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 ZPBPQ9BS86 351 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 METTL14Q9HCE5 456 aaKnown RBP12.08□□□□□ -0.48
LSM2-209ENST00000470083 CYP4F12Q9HCS2 524 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 PIGVQ9NUD9 493 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 DKK3Q9UBP4 350 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 USP25Q9UHP3 1055 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 TLK1Q9UKI8 766 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 COQ6Q9Y2Z9 468 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 TMEM184BQ9Y519 407 aaPredicted RBP12.08□□□□□ -0.48
LSM2-209ENST00000470083 SNX10Q9Y5X0 201 aa12.08□□□□□ -0.48
LSM2-209ENST00000470083 APCP25054 2843 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 TMEM202A6NGA9 273 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 TNFRSF10CO14798 259 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 MED7O43513 233 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 GRAP2O75791 330 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 STK17BO94768 372 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 PCCBP05166 539 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 STAT5AP42229 794 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 CXCR3P49682 368 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 SUOXP51687 545 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 PMS2P54278 862 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 GEMIN4P57678 1058 aaKnown RBP12.07□□□□□ -0.48
LSM2-209ENST00000470083 GCNT1Q02742 428 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 ELP6Q0PNE2 266 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 AGERQ15109 404 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 EIF2S3LQ2VIR3 472 aaKnown RBP12.07□□□□□ -0.48
LSM2-209ENST00000470083 OTUD1Q5VV17 481 aaPredicted RBP12.07□□□□□ -0.48
LSM2-209ENST00000470083 WDCPQ9H6R7 721 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 UPF2Q9HAU5 1272 aaKnown RBP12.07□□□□□ -0.48
LSM2-209ENST00000470083 MRPL40Q9NQ50 206 aaKnown RBP12.07□□□□□ -0.48
LSM2-209ENST00000470083 CNTN6Q9UQ52 1028 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 POLHQ9Y253 713 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 PCDHB3Q9Y5E6 796 aa12.07□□□□□ -0.48
LSM2-209ENST00000470083 MRPS18BQ9Y676 258 aaKnown RBP12.07□□□□□ -0.48
LSM2-209ENST00000470083 MTORP42345 2549 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms