RNA–Protein interactions for RNA: ENST00000469941.5

PCNP-204, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best) BASIC

Gene PCNP, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-204ENST00000469941 IL27RAQ6UWB1 636 aa11.23□□□□□ -0.61
PCNP-204ENST00000469941 RFLNAQ6ZTI6 216 aa11.23□□□□□ -0.61
PCNP-204ENST00000469941 TMTC1Q8IUR5 882 aa11.23□□□□□ -0.61
PCNP-204ENST00000469941 RAB7BQ96AH8 199 aa11.23□□□□□ -0.61
PCNP-204ENST00000469941 ZNF641Q96N77 438 aaPredicted RBP11.23□□□□□ -0.61
PCNP-204ENST00000469941 BAG1Q99933 345 aaPredicted RBP11.23□□□□□ -0.61
PCNP-204ENST00000469941 SEMA3CQ99985 751 aa11.23□□□□□ -0.61
PCNP-204ENST00000469941 TCEAL2Q9H3H9 227 aaPredicted RBP11.23□□□□□ -0.61
PCNP-204ENST00000469941 C10orf88Q9H8K7 445 aa11.23□□□□□ -0.61
PCNP-204ENST00000469941 GPR27Q9NS67 375 aa11.23□□□□□ -0.61
PCNP-204ENST00000469941 SEPT3Q9UH03 358 aa11.23□□□□□ -0.61
PCNP-204ENST00000469941 PCDHB9Q9Y5E1 797 aa11.23□□□□□ -0.61
PCNP-204ENST00000469941 K7ESM1 405 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 MATN3O15232 486 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 HTRA2O43464 458 aaPredicted RBP11.22□□□□□ -0.61
PCNP-204ENST00000469941 SPOPO43791 374 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 PCDHGA12O60330 932 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 PRLP01236 227 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 HLA-DQB2P05538 268 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 ZNF883P0CG24 379 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 C6P13671 934 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 CCNB1P14635 433 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 LHCGRP22888 699 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 PMLP29590 882 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 SERPINB6P35237 376 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 MMP12P39900 470 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 BCL2L1Q07817 233 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 FOXC1Q12948 553 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 DNAJC3Q13217 504 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 HNRNPDQ14103 355 aaKnown RBP11.22□□□□□ -0.61
PCNP-204ENST00000469941 FZD2Q14332 565 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 ZNF235Q14590 738 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 RFTN1Q14699 578 aaPredicted RBP11.22□□□□□ -0.61
PCNP-204ENST00000469941 TCEA2Q15560 299 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 WSCD2Q2TBF2 565 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 KAZNQ674X7 775 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 KIAA1161Q6NSJ0 714 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 TSPAN33Q86UF1 283 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 MAP7D3Q8IWC1 876 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 RHOT1Q8IXI2 618 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 TP53I13Q8NBR0 393 aaPredicted RBP11.22□□□□□ -0.61
PCNP-204ENST00000469941 CCNYQ8ND76 341 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 ARRDC2Q8TBH0 407 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 MAML1Q92585 1016 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 ZNF599Q96NL3 588 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 NUDCD1Q96RS6 583 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 ATP13A3Q9H7F0 1226 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 GDF3Q9NR23 364 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 RBM22Q9NW64 420 aaKnown RBP eCLIP11.22□□□□□ -0.61
PCNP-204ENST00000469941 PACSIN2Q9UNF0 486 aaPredicted RBP11.22□□□□□ -0.61
PCNP-204ENST00000469941 TTLL3Q9Y4R7 772 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 MGAQ8IWI9 3026 aa11.22□□□□□ -0.61
PCNP-204ENST00000469941 KMT2BQ9UMN6 2715 aaPredicted RBP11.22□□□□□ -0.61
PCNP-204ENST00000469941 MYLKQ15746 1914 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 SCAMP1O15126 338 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 HYAL3O43820 417 aaPredicted RBP11.21□□□□□ -0.61
PCNP-204ENST00000469941 JCHAINP01591 159 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 KRT1P04264 644 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 MMP2P08253 660 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 ALPIP09923 528 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 CCNCP24863 283 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 PFN3P60673 137 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 CCDC15Q0P6D6 951 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 SGCGQ13326 291 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 PDE1CQ14123 709 aaPredicted RBP11.21□□□□□ -0.61
PCNP-204ENST00000469941 SPA17Q15506 151 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 TAZQ16635 292 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 LRRC38Q5VT99 294 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 LIPIQ6XZB0 460 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 DAAM2Q86T65 1068 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 CHCHD4Q8N4Q1 142 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 OLFM3Q96PB7 478 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 TSGA13Q96PP4 275 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 SCNM1Q9BWG6 230 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 HEMGNQ9BXL5 484 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 OR1A2Q9Y585 309 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 LRP4O75096 1905 aa11.21□□□□□ -0.61
PCNP-204ENST00000469941 SPTY2D1-AS1A0A0U1RR47 76 aa11.21□□□□□ -0.62
PCNP-204ENST00000469941 NPIPB15A6NHN6 443 aaPredicted RBP11.21□□□□□ -0.62
PCNP-204ENST00000469941 TRIM38O00635 465 aa11.21□□□□□ -0.62
PCNP-204ENST00000469941 FZD6O60353 706 aa11.21□□□□□ -0.62
PCNP-204ENST00000469941 TM7SF2O76062 418 aa11.21□□□□□ -0.62
PCNP-204ENST00000469941 CTPS1P17812 591 aa11.21□□□□□ -0.62
PCNP-204ENST00000469941 EPHA8P29322 1005 aaPredicted RBP11.21□□□□□ -0.62
PCNP-204ENST00000469941 SERPINA4P29622 427 aa11.21□□□□□ -0.62
PCNP-204ENST00000469941 AKT2P31751 481 aa11.21□□□□□ -0.62
PCNP-204ENST00000469941 CYLC1P35663 651 aaPredicted RBP11.21□□□□□ -0.62
PCNP-204ENST00000469941 SLC1A1P43005 524 aa11.21□□□□□ -0.62
PCNP-204ENST00000469941 CCT8P50990 548 aa11.21□□□□□ -0.62
PCNP-204ENST00000469941 ITKQ08881 620 aa11.21□□□□□ -0.62
PCNP-204ENST00000469941 INPP5AQ14642 412 aa11.21□□□□□ -0.62
PCNP-204ENST00000469941 IFI16Q16666 785 aaKnown RBP11.21□□□□□ -0.62
PCNP-204ENST00000469941 TMEM52BQ4KMG9 183 aa11.21□□□□□ -0.62
PCNP-204ENST00000469941 BRAT1Q6PJG6 821 aa11.21□□□□□ -0.62
PCNP-204ENST00000469941 PTAR1Q7Z6K3 402 aaPredicted RBP11.21□□□□□ -0.62
PCNP-204ENST00000469941 IQCHQ86VS3 1027 aa11.21□□□□□ -0.62
PCNP-204ENST00000469941 EID2Q8N6I1 236 aa11.21□□□□□ -0.62
PCNP-204ENST00000469941 LRRC57Q8N9N7 239 aa11.21□□□□□ -0.62
PCNP-204ENST00000469941 PIH1D2Q8WWB5 315 aa11.21□□□□□ -0.62
PCNP-204ENST00000469941 ALG3Q92685 438 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms