RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 DNAAF5Q86Y56 855 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 FBXO39Q8N4B4 442 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 EXD3Q8N9H8 876 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 CCL4L1Q8NHW4 92 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 NAT6Q93015 286 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 CPEB1Q9BZB8 566 aaKnown RBP12.37□□□□□ -0.43
HDAC3-204ENST00000469207 SLC39A8Q9C0K1 460 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 NUP62CLQ9H1M0 184 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 RETREG1Q9H6L5 497 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 SEPT11Q9NVA2 429 aaKnown RBP12.37□□□□□ -0.43
HDAC3-204ENST00000469207 FANCLQ9NW38 375 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 DKK3Q9UBP4 350 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 GPR34Q9UPC5 381 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 SIK3Q9Y2K2 1263 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 TTC24A2A3L6 582 aaPredicted RBP12.36□□□□□ -0.43
HDAC3-204ENST00000469207 TMEM202A6NGA9 273 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 ZSCAN5CA6NGD5 496 aaPredicted RBP12.36□□□□□ -0.43
HDAC3-204ENST00000469207 B8ZZF3 427 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 RPLP0P05388 317 aaKnown RBP12.36□□□□□ -0.43
HDAC3-204ENST00000469207 ITIH1P19827 911 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 STAT1P42224 750 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 PEX5P50542 639 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 ELOCQ15369 112 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 CA9Q16790 459 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 CDKAL1Q5VV42 579 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 ARHGAP36Q6ZRI8 547 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 RAB11FIP2Q7L804 512 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 TMPRSS9Q7Z410 1059 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 PHF13Q86YI8 300 aaPredicted RBP12.36□□□□□ -0.43
HDAC3-204ENST00000469207 JAMLQ86YT9 394 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 TP53INP2Q8IXH6 220 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 PELI3Q8N2H9 469 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 ARL10Q8N8L6 244 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 TSEN2Q8NCE0 465 aaKnown RBP12.36□□□□□ -0.43
HDAC3-204ENST00000469207 C3orf20Q8ND61 904 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 OR1E3Q8WZA6 343 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 GRAMD1AQ96CP6 724 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 WBP1Q96G27 269 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 PDXPQ96GD0 296 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 MCEEQ96PE7 176 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 GFM1Q96RP9 751 aaKnown RBP12.36□□□□□ -0.43
HDAC3-204ENST00000469207 NCAPGQ9BPX3 1015 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 LGR4Q9BXB1 951 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 C1QTNF7Q9BXJ2 289 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 LRRN3Q9H3W5 708 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 PDFQ9HBH1 243 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.36□□□□□ -0.43
HDAC3-204ENST00000469207 DACH1Q9UI36 760 aa12.36□□□□□ -0.43
HDAC3-204ENST00000469207 WASH4PA8MWX3 477 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 PLD2O14939 933 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 RASGRP1O95267 797 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 TNFP01375 233 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 GM2AP17900 193 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 ETV5P41161 510 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 PAPOLAP51003 745 aaKnown RBP12.35□□□□□ -0.43
HDAC3-204ENST00000469207 BLKP51451 505 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 ZNF143P52747 638 aaPredicted RBP12.35□□□□□ -0.43
HDAC3-204ENST00000469207 YBEYP58557 167 aaPredicted RBP12.35□□□□□ -0.43
HDAC3-204ENST00000469207 ELP6Q0PNE2 266 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 NFATC4Q14934 902 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 SYCP1Q15431 976 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 LINC00303Q3SY05 128 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 EFHC2Q5JST6 749 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 TRIM72Q6ZMU5 477 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 MON1BQ7L1V2 547 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 GKN2Q86XP6 184 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 UMODL1-AS1Q8N2C9 162 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 FSTL5Q8N475 847 aaPredicted RBP12.35□□□□□ -0.43
HDAC3-204ENST00000469207 ARFGAP1Q8N6T3 406 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 ENOX1Q8TC92 643 aaKnown RBP12.35□□□□□ -0.43
HDAC3-204ENST00000469207 SCG3Q8WXD2 468 aaKnown RBP12.35□□□□□ -0.43
HDAC3-204ENST00000469207 CASKIN2Q8WXE0 1202 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 CCDC97Q96F63 343 aaPredicted RBP12.35□□□□□ -0.43
HDAC3-204ENST00000469207 MED8Q96G25 268 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 TBATAQ96M53 351 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 PCMTD1Q96MG8 357 aaPredicted RBP12.35□□□□□ -0.43
HDAC3-204ENST00000469207 CCNL2Q96S94 520 aaPredicted RBP12.35□□□□□ -0.43
HDAC3-204ENST00000469207 AGPAT1Q99943 283 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 TMEM168Q9H0V1 697 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 LRRC19Q9H756 370 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 TAS2R14Q9NYV8 317 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 UBA2Q9UBT2 640 aaPredicted RBP12.35□□□□□ -0.43
HDAC3-204ENST00000469207 KLQ9UEF7 1012 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 PISDQ9UG56 409 aa12.35□□□□□ -0.43
HDAC3-204ENST00000469207 ASH1LQ9NR48 2969 aaKnown RBP12.35□□□□□ -0.43
HDAC3-204ENST00000469207 TSPAN11A1L157 253 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 TMEM110-MUSTN1A8MSY1 372 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 D6RAR5 112 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 TOR1BO14657 336 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 RECQL5O94762 991 aaPredicted RBP12.34□□□□□ -0.43
HDAC3-204ENST00000469207 CALB1P05937 261 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 ITGA2BP08514 1039 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 ALPIP09923 528 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 HTR1BP28222 390 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 COPB1P53618 953 aaKnown RBP12.34□□□□□ -0.43
HDAC3-204ENST00000469207 INHBCP55103 352 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 GSCP56915 257 aaPredicted RBP12.34□□□□□ -0.43
HDAC3-204ENST00000469207 NFKB2Q00653 900 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 RALGDSQ12967 914 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 PTPRRQ15256 657 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms