RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 DESP17661 470 aa24.67■■□□□ 1.54
PTCH1-210ENST00000468211 LSSP48449 732 aa24.67■■□□□ 1.54
PTCH1-210ENST00000468211 INPP5AQ14642 412 aa24.67■■□□□ 1.54
PTCH1-210ENST00000468211 GRM3Q14832 879 aa24.67■■□□□ 1.54
PTCH1-210ENST00000468211 ALG11Q2TAA5 492 aa24.67■■□□□ 1.54
PTCH1-210ENST00000468211 PPP6R3Q5H9R7 873 aaPredicted RBP24.67■■□□□ 1.54
PTCH1-210ENST00000468211 NAF1Q96HR8 494 aaKnown RBP24.67■■□□□ 1.54
PTCH1-210ENST00000468211 HIC2Q96JB3 615 aa24.67■■□□□ 1.54
PTCH1-210ENST00000468211 BPIFA3Q9BQP9 254 aa24.67■■□□□ 1.54
PTCH1-210ENST00000468211 POLR1BQ9H9Y6 1135 aa24.67■■□□□ 1.54
PTCH1-210ENST00000468211 AIPL1Q9NZN9 384 aa24.67■■□□□ 1.54
PTCH1-210ENST00000468211 OR1A2Q9Y585 309 aa24.67■■□□□ 1.54
PTCH1-210ENST00000468211 PMS2P1A4D2B8 440 aa24.66■■□□□ 1.54
PTCH1-210ENST00000468211 DFFAO00273 331 aa24.66■■□□□ 1.54
PTCH1-210ENST00000468211 PALMO75781 387 aa24.66■■□□□ 1.54
PTCH1-210ENST00000468211 DXOO77932 396 aaKnown RBP24.66■■□□□ 1.54
PTCH1-210ENST00000468211 CSNK1DP48730 415 aa24.66■■□□□ 1.54
PTCH1-210ENST00000468211 RALGDSQ12967 914 aa24.66■■□□□ 1.54
PTCH1-210ENST00000468211 PPP1R2P3Q6NXS1 205 aa24.66■■□□□ 1.54
PTCH1-210ENST00000468211 BRAT1Q6PJG6 821 aa24.66■■□□□ 1.54
PTCH1-210ENST00000468211 HID1Q8IV36 788 aa24.66■■□□□ 1.54
PTCH1-210ENST00000468211 ATXN7L3BQ96GX2 97 aa24.66■■□□□ 1.54
PTCH1-210ENST00000468211 ZNF578Q96N58 590 aaPredicted RBP24.66■■□□□ 1.54
PTCH1-210ENST00000468211 FCRL3Q96P31 734 aaPredicted RBP24.66■■□□□ 1.54
PTCH1-210ENST00000468211 TUBGCP5Q96RT8 1024 aa24.66■■□□□ 1.54
PTCH1-210ENST00000468211 APOOQ9BUR5 198 aa24.66■■□□□ 1.54
PTCH1-210ENST00000468211 NAT10Q9H0A0 1025 aaKnown RBP24.66■■□□□ 1.54
PTCH1-210ENST00000468211 ASCL3Q9NQ33 180 aa24.66■■□□□ 1.54
PTCH1-210ENST00000468211 CWC15Q9P013 229 aaKnown RBP24.66■■□□□ 1.54
PTCH1-210ENST00000468211 CNOT8Q9UFF9 292 aaKnown RBP24.66■■□□□ 1.54
PTCH1-210ENST00000468211 ATP8A1Q9Y2Q0 1164 aa24.66■■□□□ 1.54
PTCH1-210ENST00000468211 ENTPD2Q9Y5L3 495 aa24.66■■□□□ 1.54
PTCH1-210ENST00000468211 GCN1Q92616 2671 aaKnown RBP24.66■■□□□ 1.54
PTCH1-210ENST00000468211 EIF3CLB5ME19 914 aaKnown RBP24.65■■□□□ 1.54
PTCH1-210ENST00000468211 DAPK3O43293 454 aa24.65■■□□□ 1.54
PTCH1-210ENST00000468211 LRCH4O75427 683 aa24.65■■□□□ 1.54
PTCH1-210ENST00000468211 GZMAP12544 262 aa24.65■■□□□ 1.54
PTCH1-210ENST00000468211 SKILP12757 684 aa24.65■■□□□ 1.54
PTCH1-210ENST00000468211 PRKCIP41743 596 aa24.65■■□□□ 1.54
PTCH1-210ENST00000468211 PEX5P50542 639 aa24.65■■□□□ 1.54
PTCH1-210ENST00000468211 HK3P52790 923 aa24.65■■□□□ 1.54
PTCH1-210ENST00000468211 AGERQ15109 404 aa24.65■■□□□ 1.54
PTCH1-210ENST00000468211 ERAP2Q6P179 960 aa24.65■■□□□ 1.54
PTCH1-210ENST00000468211 ENPP7Q6UWV6 458 aa24.65■■□□□ 1.54
PTCH1-210ENST00000468211 PLA2G15Q8NCC3 412 aa24.65■■□□□ 1.54
PTCH1-210ENST00000468211 EIF3CQ99613 913 aaKnown RBP24.65■■□□□ 1.54
PTCH1-210ENST00000468211 DONSONQ9NYP3 566 aa24.65■■□□□ 1.54
PTCH1-210ENST00000468211 SATB2Q9UPW6 733 aa24.65■■□□□ 1.54
PTCH1-210ENST00000468211 PRPSAP2O60256 369 aa24.64■■□□□ 1.54
PTCH1-210ENST00000468211 RNF8O76064 485 aa24.64■■□□□ 1.54
PTCH1-210ENST00000468211 PRB1P04280 392 aa24.64■■□□□ 1.54
PTCH1-210ENST00000468211 PCCBP05166 539 aa24.64■■□□□ 1.54
PTCH1-210ENST00000468211 TCF4P15884 667 aa24.64■■□□□ 1.54
PTCH1-210ENST00000468211 NFATC4Q14934 902 aa24.64■■□□□ 1.54
PTCH1-210ENST00000468211 C3orf38Q5JPI3 329 aa24.64■■□□□ 1.54
PTCH1-210ENST00000468211 CFAP58Q5T655 872 aa24.64■■□□□ 1.54
PTCH1-210ENST00000468211 RD3Q7Z3Z2 195 aa24.64■■□□□ 1.54
PTCH1-210ENST00000468211 PCDH19Q8TAB3 1148 aa24.64■■□□□ 1.54
PTCH1-210ENST00000468211 FNIP1Q8TF40 1166 aa24.64■■□□□ 1.54
PTCH1-210ENST00000468211 ZNF653Q96CK0 615 aa24.64■■□□□ 1.54
PTCH1-210ENST00000468211 ECHDC3Q96DC8 303 aa24.64■■□□□ 1.54
PTCH1-210ENST00000468211 UBL7Q96S82 380 aaPredicted RBP24.64■■□□□ 1.54
PTCH1-210ENST00000468211 LGMNQ99538 433 aa24.64■■□□□ 1.54
PTCH1-210ENST00000468211 CINPQ9BW66 212 aaPredicted RBP24.64■■□□□ 1.54
PTCH1-210ENST00000468211 ATP13A3Q9H7F0 1226 aa24.64■■□□□ 1.54
PTCH1-210ENST00000468211 SP110Q9HB58 689 aa24.64■■□□□ 1.54
PTCH1-210ENST00000468211 PADI4Q9UM07 663 aa24.64■■□□□ 1.54
PTCH1-210ENST00000468211 KALRNO60229 2985 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 A0A1B0GTH6 734 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 TTC24A2A3L6 582 aaPredicted RBP24.63■■□□□ 1.53
PTCH1-210ENST00000468211 GM2AP17900 193 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 IL1R2P27930 398 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 SERPINA4P29622 427 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 RPIAP49247 311 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 PDX1P52945 283 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 PCBP4P57723 403 aaKnown RBP24.63■■□□□ 1.53
PTCH1-210ENST00000468211 IL10RBQ08334 325 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 KLHL30Q0D2K2 578 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 DPYSQ14117 519 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 RBM44Q6ZP01 1051 aaKnown RBP24.63■■□□□ 1.53
PTCH1-210ENST00000468211 LSMEM2Q8N112 164 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 KYQ8NBH2 561 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 ZNF248Q8NDW4 579 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 GLMNQ92990 594 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 FUBP1Q96AE4 644 aaKnown RBP24.63■■□□□ 1.53
PTCH1-210ENST00000468211 PRR11Q96HE9 360 aaPredicted RBP24.63■■□□□ 1.53
PTCH1-210ENST00000468211 CCDC3Q9BQI4 270 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 EDEM3Q9BZQ6 932 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 SIRPGQ9P1W8 387 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 MYO1AQ9UBC5 1043 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 GULP1Q9UBP9 304 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 RABGEF1Q9UJ41 708 aa24.63■■□□□ 1.53
PTCH1-210ENST00000468211 ARHGEF17Q96PE2 2063 aaPredicted RBP24.62■■□□□ 1.53
PTCH1-210ENST00000468211 A0A1W2PQC6 194 aa24.62■■□□□ 1.53
PTCH1-210ENST00000468211 TMEM110-MUSTN1A8MSY1 372 aa24.62■■□□□ 1.53
PTCH1-210ENST00000468211 SMTNL1A8MU46 457 aa24.62■■□□□ 1.53
PTCH1-210ENST00000468211 TRAFD1O14545 582 aaPredicted RBP24.62■■□□□ 1.53
PTCH1-210ENST00000468211 RASGRP1O95267 797 aa24.62■■□□□ 1.53
PTCH1-210ENST00000468211 HCAR3P49019 387 aa24.62■■□□□ 1.53
PTCH1-210ENST00000468211 BLKP51451 505 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms