RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 FSTL5Q8N475 847 aaPredicted RBP19.31■□□□□ 0.68
COL9A3-206ENST00000466532 NAT6Q93015 286 aa19.31■□□□□ 0.68
COL9A3-206ENST00000466532 TSACCQ96A04 125 aaPredicted RBP19.31■□□□□ 0.68
COL9A3-206ENST00000466532 ATXN7L3BQ96GX2 97 aa19.31■□□□□ 0.68
COL9A3-206ENST00000466532 TUBGCP5Q96RT8 1024 aa19.31■□□□□ 0.68
COL9A3-206ENST00000466532 PEBP4Q96S96 227 aa19.31■□□□□ 0.68
COL9A3-206ENST00000466532 KCTD15Q96SI1 283 aaPredicted RBP19.31■□□□□ 0.68
COL9A3-206ENST00000466532 NAT10Q9H0A0 1025 aaKnown RBP19.31■□□□□ 0.68
COL9A3-206ENST00000466532 SP110Q9HB58 689 aa19.31■□□□□ 0.68
COL9A3-206ENST00000466532 RTN4Q9NQC3 1192 aaKnown RBP19.31■□□□□ 0.68
COL9A3-206ENST00000466532 SATB2Q9UPW6 733 aa19.31■□□□□ 0.68
COL9A3-206ENST00000466532 ATP8A1Q9Y2Q0 1164 aa19.31■□□□□ 0.68
COL9A3-206ENST00000466532 ENTPD2Q9Y5L3 495 aa19.31■□□□□ 0.68
COL9A3-206ENST00000466532 PALMO75781 387 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 RNF8O76064 485 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 CTSEP14091 401 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 HTR1BP28222 390 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 MMP12P39900 470 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 RGRP47804 291 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 HK3P52790 923 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 CXADRP78310 365 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 NFATC4Q14934 902 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 ELOCQ15369 112 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 TCEA2Q15560 299 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 ASIC2Q16515 512 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 ANO6Q4KMQ2 910 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 PPP6R3Q5H9R7 873 aaPredicted RBP19.3■□□□□ 0.68
COL9A3-206ENST00000466532 ESRP1Q6NXG1 681 aaKnown RBP19.3■□□□□ 0.68
COL9A3-206ENST00000466532 ENPP7Q6UWV6 458 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 RFX8Q6ZV50 586 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 RD3Q7Z3Z2 195 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 ARFGAP1Q8N6T3 406 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 TSEN2Q8NCE0 465 aaKnown RBP19.3■□□□□ 0.68
COL9A3-206ENST00000466532 GRAMD1AQ96CP6 724 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 HIC2Q96JB3 615 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 APOOQ9BUR5 198 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 CINPQ9BW66 212 aaPredicted RBP19.3■□□□□ 0.68
COL9A3-206ENST00000466532 HAUS4Q9H6D7 363 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 ATP13A3Q9H7F0 1226 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 ASCL3Q9NQ33 180 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 THSD1Q9NS62 852 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 PADI4Q9UM07 663 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 SCN8AQ9UQD0 1980 aa19.3■□□□□ 0.68
COL9A3-206ENST00000466532 ARHGEF17Q96PE2 2063 aaPredicted RBP19.29■□□□□ 0.68
COL9A3-206ENST00000466532 TMEM191CA6NGB0 347 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 DFFAO00273 331 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 ATXN7O15265 892 aaPredicted RBP19.29■□□□□ 0.68
COL9A3-206ENST00000466532 PRPSAP2O60256 369 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 TCEA3O75764 348 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 RASGRP1O95267 797 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 PCCBP05166 539 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 ALPIP09923 528 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 ERCC2P18074 760 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 SERPINA4P29622 427 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 CSNK1DP48730 415 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 INPP5AQ14642 412 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 AGERQ15109 404 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 ALG11Q2TAA5 492 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 ARHGAP12Q8IWW6 846 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 PAF1Q8N7H5 531 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 PCDH19Q8TAB3 1148 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 SCG3Q8WXD2 468 aaKnown RBP19.29■□□□□ 0.68
COL9A3-206ENST00000466532 SLC39A7Q92504 469 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 CCDC3Q9BQI4 270 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 EDEM3Q9BZQ6 932 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 TRIM7Q9C029 511 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 SYNDIG1Q9H7V2 258 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 SIRPGQ9P1W8 387 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 GULP1Q9UBP9 304 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 CNOT8Q9UFF9 292 aaKnown RBP19.29■□□□□ 0.68
COL9A3-206ENST00000466532 OR1A2Q9Y585 309 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 UNC13CQ8NB66 2214 aa19.29■□□□□ 0.68
COL9A3-206ENST00000466532 GCN1Q92616 2671 aaKnown RBP19.28■□□□□ 0.68
COL9A3-206ENST00000466532 TEX51A0A1B0GUA7 166 aa19.28■□□□□ 0.68
COL9A3-206ENST00000466532 CASC3O15234 703 aaKnown RBP19.28■□□□□ 0.68
COL9A3-206ENST00000466532 FTLP02792 175 aaPredicted RBP19.28■□□□□ 0.68
COL9A3-206ENST00000466532 PRB1P04280 392 aa19.28■□□□□ 0.68
COL9A3-206ENST00000466532 RBMS1P29558 406 aaKnown RBP19.28■□□□□ 0.68
COL9A3-206ENST00000466532 MIPP30301 263 aa19.28■□□□□ 0.68
COL9A3-206ENST00000466532 FILIP1LQ4L180 1135 aa19.28■□□□□ 0.68
COL9A3-206ENST00000466532 BROXQ5VW32 411 aa19.28■□□□□ 0.68
COL9A3-206ENST00000466532 AFMIDQ63HM1 303 aa19.28■□□□□ 0.68
COL9A3-206ENST00000466532 ARHGAP36Q6ZRI8 547 aa19.28■□□□□ 0.68
COL9A3-206ENST00000466532 NYAP1Q6ZVC0 841 aa19.28■□□□□ 0.68
COL9A3-206ENST00000466532 ZNF571Q7Z3V5 609 aaPredicted RBP19.28■□□□□ 0.68
COL9A3-206ENST00000466532 NPWQ8N729 165 aa19.28■□□□□ 0.68
COL9A3-206ENST00000466532 ARL10Q8N8L6 244 aa19.28■□□□□ 0.68
COL9A3-206ENST00000466532 ATL2Q8NHH9 583 aa19.28■□□□□ 0.68
COL9A3-206ENST00000466532 WDR48Q8TAF3 677 aa19.28■□□□□ 0.68
COL9A3-206ENST00000466532 FNIP1Q8TF40 1166 aa19.28■□□□□ 0.68
COL9A3-206ENST00000466532 KCNE4Q8WWG9 221 aa19.28■□□□□ 0.68
COL9A3-206ENST00000466532 KLQ9UEF7 1012 aa19.28■□□□□ 0.68
COL9A3-206ENST00000466532 A0A1W2PNU3 283 aaPredicted RBP19.27■□□□□ 0.68
COL9A3-206ENST00000466532 GZMAP12544 262 aa19.27■□□□□ 0.68
COL9A3-206ENST00000466532 SRP54P61011 504 aaKnown RBP19.27■□□□□ 0.68
COL9A3-206ENST00000466532 BCL2L1Q07817 233 aa19.27■□□□□ 0.68
COL9A3-206ENST00000466532 IL10RBQ08334 325 aa19.27■□□□□ 0.68
COL9A3-206ENST00000466532 RALGDSQ12967 914 aa19.27■□□□□ 0.68
COL9A3-206ENST00000466532 MTM1Q13496 603 aa19.27■□□□□ 0.68
COL9A3-206ENST00000466532 SPIDRQ14159 915 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms