RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 SUN1O94901 812 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 ZWINTO95229 277 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 VIMP08670 466 aaKnown RBP8.47□□□□□ -1.05
LSG1-206ENST00000466391 TPSB2P20231 275 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 TAC1P20366 129 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 APEX1P27695 318 aaKnown RBP8.47□□□□□ -1.05
LSG1-206ENST00000466391 STX2P32856 288 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 MAGEA3P43357 314 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 HDAC4P56524 1084 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 BCAR1P56945 870 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 DYNLT1P63172 113 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 SPARCL1Q14515 664 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 KRT81Q14533 505 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 TAF5Q15542 800 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 TPSAB1Q15661 275 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 PDK4Q16654 411 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 C15orf59Q2T9L4 293 aaPredicted RBP8.47□□□□□ -1.05
LSG1-206ENST00000466391 GALNTL6Q49A17 601 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 EFHC1Q5JVL4 640 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 SPDYAQ5MJ70 313 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 FNBP1LQ5T0N5 605 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 GPR158Q5T848 1215 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 KANK2Q63ZY3 851 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 TIGD7Q6NT04 549 aaPredicted RBP8.47□□□□□ -1.05
LSG1-206ENST00000466391 TAF2Q6P1X5 1199 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 DARS2Q6PI48 645 aaKnown RBP8.47□□□□□ -1.05
LSG1-206ENST00000466391 CXXC5Q7LFL8 322 aaKnown RBP8.47□□□□□ -1.05
LSG1-206ENST00000466391 TRPM8Q7Z2W7 1104 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 SPATA21Q7Z572 469 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 ACOT1Q86TX2 421 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 RPAINQ86UA6 219 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 SUGP1Q8IWZ8 645 aaKnown RBP8.47□□□□□ -1.05
LSG1-206ENST00000466391 SRRM1Q8IYB3 904 aaKnown RBP8.47□□□□□ -1.05
LSG1-206ENST00000466391 C12orf29Q8N999 325 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 FAM71DQ8N9W8 422 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.47□□□□□ -1.05
LSG1-206ENST00000466391 FAM172AQ8WUF8 416 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 SOCS4Q8WXH5 440 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 SMC6Q96SB8 1091 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 HNRNPABQ99729 332 aaKnown RBP8.47□□□□□ -1.05
LSG1-206ENST00000466391 CALN1Q9BXU9 219 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 KRTAP9-2Q9BYQ4 174 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 TRIM6Q9C030 488 aaPredicted RBP8.47□□□□□ -1.05
LSG1-206ENST00000466391 NXF3Q9H4D5 531 aaKnown RBP8.47□□□□□ -1.05
LSG1-206ENST00000466391 TRABDQ9H4I3 376 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 KCNK9Q9NPC2 374 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 HAUS2Q9NVX0 235 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 ZNF180Q9UJW8 692 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 ARL2BPQ9Y2Y0 163 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.47□□□□□ -1.05
LSG1-206ENST00000466391 TEX264Q9Y6I9 313 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 CAPN7Q9Y6W3 813 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 TRIP12Q14669 1992 aaPredicted RBP8.47□□□□□ -1.05
LSG1-206ENST00000466391 TSC2P49815 1807 aa8.47□□□□□ -1.05
LSG1-206ENST00000466391 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.46□□□□□ -1.06
LSG1-206ENST00000466391 C17orf102A2RUQ5 167 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 CFAP73A6NFT4 308 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 MANSC4A6NHS7 340 aaPredicted RBP8.46□□□□□ -1.06
LSG1-206ENST00000466391 A8MXQ7 604 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 TCP11X1B4DZS4 312 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 ANKRD65E5RJM6 399 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 DNM1LO00429 736 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 TRDMT1O14717 391 aaKnown RBP8.46□□□□□ -1.06
LSG1-206ENST00000466391 GABRDO14764 452 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 ULK1O75385 1050 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 GCATO75600 419 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 IL1BP01584 269 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 C1QAP02745 245 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 ALADP13716 330 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 PAX3P23760 479 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 GNL1P36915 607 aaPredicted RBP8.46□□□□□ -1.06
LSG1-206ENST00000466391 RGS2P41220 211 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 SKIV2L2P42285 1042 aaKnown RBP8.46□□□□□ -1.06
LSG1-206ENST00000466391 IFNAR2P48551 515 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 AIF1P55008 147 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 CDK16Q00536 496 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 MYBPC3Q14896 1274 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 PKN2Q16513 984 aaKnown RBP8.46□□□□□ -1.06
LSG1-206ENST00000466391 KRTAP19-4Q3LI73 84 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 SLC45A4Q5BKX6 768 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 CYS1Q717R9 158 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 BZW1Q7L1Q6 419 aaKnown RBP8.46□□□□□ -1.06
LSG1-206ENST00000466391 OTOP2Q7RTS6 562 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 HACE1Q8IYU2 909 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 FBXO36Q8NEA4 188 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 APPL2Q8NEU8 664 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 OR6B3Q8NGW1 331 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 ZNF398Q8TD17 642 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 DCAKDQ8WVC6 231 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 SLC44A1Q8WWI5 657 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 NT5C3BQ969T7 300 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 C18orf25Q96B23 403 aaPredicted RBP8.46□□□□□ -1.06
LSG1-206ENST00000466391 LCORQ96JN0 433 aaPredicted RBP8.46□□□□□ -1.06
LSG1-206ENST00000466391 QKIQ96PU8 341 aaKnown RBP eCLIP8.46□□□□□ -1.06
LSG1-206ENST00000466391 PPP1R10Q96QC0 940 aaKnown RBP8.46□□□□□ -1.06
LSG1-206ENST00000466391 TGS1Q96RS0 853 aaKnown RBP8.46□□□□□ -1.06
LSG1-206ENST00000466391 CYTH2Q99418 400 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 PAFAH2Q99487 392 aa8.46□□□□□ -1.06
LSG1-206ENST00000466391 ELAC2Q9BQ52 826 aaKnown RBP8.46□□□□□ -1.06
LSG1-206ENST00000466391 KLC2Q9H0B6 622 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms