RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 FUT2Q10981 343 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 DCTN2Q13561 401 aaKnown RBP9.5□□□□□ -0.89
SCAF11-205ENST00000465950 PON2Q15165 354 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 ETNPPLQ8TBG4 499 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 ZNF398Q8TD17 642 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 ZBTB45Q96K62 511 aaPredicted RBP9.5□□□□□ -0.89
SCAF11-205ENST00000465950 BTBD6Q96KE9 485 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 SEMA3CQ99985 751 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 SEMA3GQ9NS98 782 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 TMCC3Q9ULS5 477 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 DNAJC16Q9Y2G8 782 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 PHRF1Q9P1Y6 1649 aaKnown RBP9.5□□□□□ -0.89
SCAF11-205ENST00000465950 E5RJQ4 531 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 ECI2O75521 394 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 ZACNQ401N2 412 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 OR2T34Q8NGX1 318 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 DPY30Q9C005 99 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 EBF3Q9H4W6 596 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 CAAP1Q9H8G2 361 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 PCDHA3Q9Y5H8 950 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 FCHO1O14526 889 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 B4GALT5O43286 388 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 LMNAP02545 664 aaKnown RBP9.5□□□□□ -0.89
SCAF11-205ENST00000465950 CD6P30203 668 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 RRM2P31350 389 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 PTPN7P35236 360 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 GRK6P43250 576 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 FMR1Q06787 632 aaKnown RBP eCLIP9.5□□□□□ -0.893e-7■■□□□ 14.4
SCAF11-205ENST00000465950 BMPR2Q13873 1038 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 ELAVL3Q14576 367 aaKnown RBP9.5□□□□□ -0.89
SCAF11-205ENST00000465950 LAIR1Q6GTX8 287 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 FAM45BPQ6NSW5 357 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 TRMT10CQ7L0Y3 403 aaKnown RBP9.5□□□□□ -0.89
SCAF11-205ENST00000465950 ABHD13Q7L211 337 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 C12orf40Q86WS4 652 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 IFNLR1Q8IU57 520 aaPredicted RBP9.5□□□□□ -0.89
SCAF11-205ENST00000465950 RASGEF1AQ8N9B8 481 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 FAM45AQ8TCE6 357 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 TATDN2Q93075 761 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 PPWD1Q96BP3 646 aaKnown RBP9.5□□□□□ -0.89
SCAF11-205ENST00000465950 NXPE2Q96DL1 559 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 KLHL4Q9C0H6 718 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 PCED1AQ9H1Q7 454 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 VPS18Q9P253 973 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 MTMR11A4FU01 709 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 IPO13O94829 963 aaKnown RBP9.5□□□□□ -0.89
SCAF11-205ENST00000465950 STBD1O95210 358 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 ICAM2P13598 275 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 VIPR1P32241 457 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 RAB28P51157 221 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 ETF1P62495 437 aaKnown RBP9.5□□□□□ -0.89
SCAF11-205ENST00000465950 HYIQ5T013 277 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 SCUBE3Q8IX30 993 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 CMASQ8NFW8 434 aaPredicted RBP9.5□□□□□ -0.89
SCAF11-205ENST00000465950 PTCD2Q8WV60 388 aaKnown RBP9.5□□□□□ -0.89
SCAF11-205ENST00000465950 TAPBPLQ9BX59 468 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 EIF2AQ9BY44 585 aaKnown RBP9.5□□□□□ -0.89
SCAF11-205ENST00000465950 LMBRD1Q9NUN5 540 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 WNT16Q9UBV4 365 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 DCDC2Q9UHG0 476 aa9.5□□□□□ -0.89
SCAF11-205ENST00000465950 TEX28O15482 410 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 EDNRBP24530 442 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 PCK1P35558 622 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 GNPDA1P46926 289 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 CARSP49589 748 aaKnown RBP9.49□□□□□ -0.89
SCAF11-205ENST00000465950 GUCY2FP51841 1108 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 SH3BGRP55822 239 aaPredicted RBP9.49□□□□□ -0.89
SCAF11-205ENST00000465950 ATP6V0D1P61421 351 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 ACSM2AQ08AH3 577 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 TAF13Q15543 124 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 PDCD2Q16342 344 aaPredicted RBP9.49□□□□□ -0.89
SCAF11-205ENST00000465950 FIGNQ5HY92 759 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 ACSM2BQ68CK6 577 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 C11orf88Q6PI97 169 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 PIM3Q86V86 326 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 TMPRSS6Q8IU80 811 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 MMAAQ8IVH4 418 aaKnown RBP9.49□□□□□ -0.89
SCAF11-205ENST00000465950 ADHFE1Q8IWW8 467 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 UNC5BQ8IZJ1 945 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 LRRC39Q96DD0 335 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 RNF39Q9H2S5 420 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 RHBGQ9H310 441 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 SPTLC3Q9NUV7 552 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 EXD2Q9NVH0 621 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 ACSL5Q9ULC5 683 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 ACOT9Q9Y305 439 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.49□□□□□ -0.89
SCAF11-205ENST00000465950 WASHC1A8K0Z3 465 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 WASH3PC4AMC7 463 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 CCDC22O60826 627 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 NDST3O95803 873 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 LRPAP1P30533 357 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 MGAT5Q09328 741 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 PLCH1Q4KWH8 1693 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 PKDCCQ504Y2 493 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 RFTN2Q52LD8 501 aaPredicted RBP9.49□□□□□ -0.89
SCAF11-205ENST00000465950 COBLL1Q53SF7 1204 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 CRTC3Q6UUV7 619 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 WASH2PQ6VEQ5 465 aa9.49□□□□□ -0.89
SCAF11-205ENST00000465950 ERN2Q76MJ5 926 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms