RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 SIX1Q15475 284 aaPredicted RBP17.06■□□□□ 0.32
USP39-211ENST00000465282 TMEM52BQ4KMG9 183 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 SETMARQ53H47 684 aaPredicted RBP17.06■□□□□ 0.32
USP39-211ENST00000465282 ANKRD20A2Q5SQ80 823 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 ANKRD20A1Q5TYW2 823 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 ANKRD20A3Q5VUR7 823 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 ADAT2Q7Z6V5 191 aaKnown RBP17.06■□□□□ 0.32
USP39-211ENST00000465282 RGL4Q8IZJ4 473 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 DEFB119Q8N690 84 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 GPR161Q8N6U8 529 aaKnown RBP17.06■□□□□ 0.32
USP39-211ENST00000465282 PDCD6IPQ8WUM4 868 aaKnown RBP17.06■□□□□ 0.32
USP39-211ENST00000465282 RTP4Q96DX8 246 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 SCRN2Q96FV2 425 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 WDR24Q96S15 920 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 PHOX2BQ99453 314 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 FAM118BQ9BPY3 351 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 PCDH9Q9HC56 1237 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 PCDH12Q9NPG4 1184 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 FAM153AQ9UHL3 310 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 ZNF148Q9UQR1 794 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 LRRK1Q38SD2 2015 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 A0A1W2PQU0 124 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 ANXA9O76027 345 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 CD68P34810 354 aaPredicted RBP17.05■□□□□ 0.32
USP39-211ENST00000465282 MPLP40238 635 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 TNNT3P45378 269 aaPredicted RBP17.05■□□□□ 0.32
USP39-211ENST00000465282 ETF1P62495 437 aaKnown RBP17.05■□□□□ 0.32
USP39-211ENST00000465282 PRPSAP1Q14558 356 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 DUOXA1Q1HG43 343 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 TMEM259Q4ZIN3 620 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 PLA2G2CQ5R387 149 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 CCDC70Q6NSX1 233 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 USP45Q70EL2 814 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 ARMCX6Q7L4S7 300 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 ZSWIM9Q86XI8 627 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 PIH1D2Q8WWB5 315 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 C1orf54Q8WWF1 131 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 ATG4AQ8WYN0 398 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 PIGKQ92643 395 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 SRPK1Q96SB4 655 aaKnown RBP17.05■□□□□ 0.32
USP39-211ENST00000465282 RBM15Q96T37 977 aaKnown RBP eCLIP17.05■□□□□ 0.32
USP39-211ENST00000465282 TMEM121Q9BTD3 319 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 GBA3Q9H227 469 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 ARRDC1-AS1Q9H2J1 176 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 RNF14Q9UBS8 474 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 RSPH14Q9UHP6 348 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 EIF2B4Q9UI10 523 aaKnown RBP17.05■□□□□ 0.32
USP39-211ENST00000465282 AAR2Q9Y312 384 aaKnown RBP17.05■□□□□ 0.32
USP39-211ENST00000465282 SAR1BQ9Y6B6 198 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 PLXNA2O75051 1894 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 PIEZO1Q92508 2521 aa17.05■□□□□ 0.32
USP39-211ENST00000465282 A0A1B0GTW7 788 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 SPINT1O43278 529 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 CYP2A6P11509 494 aaPredicted RBP17.04■□□□□ 0.32
USP39-211ENST00000465282 NFKB1P19838 968 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 ACTN2P35609 894 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 MMP12P39900 470 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 GRIA4P48058 902 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 EPHB1P54762 984 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 LMNB2Q03252 620 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 SGCGQ13326 291 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 MPP3Q13368 585 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 IHHQ14623 411 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 ZNF284Q2VY69 593 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 P3H1Q32P28 736 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 C4orf22Q6V702 233 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 DPPA4Q7L190 304 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 ASCL5Q7RTU5 278 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.04■□□□□ 0.32
USP39-211ENST00000465282 FAM71DQ8N9W8 422 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 C1orf216Q8TAB5 229 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 FAM174AQ8TBP5 190 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 CXorf40AQ8TE69 158 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 COG1Q8WTW3 980 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 SNX19Q92543 992 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 LRRC45Q96CN5 670 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 IFT43Q96FT9 208 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 LENG8Q96PV6 779 aaPredicted RBP17.04■□□□□ 0.32
USP39-211ENST00000465282 MCCC1Q96RQ3 725 aaPredicted RBP17.04■□□□□ 0.32
USP39-211ENST00000465282 C1QTNF7Q9BXJ2 289 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 C1QTNF2Q9BXJ5 285 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 SLC17A9Q9BYT1 436 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 C10orf88Q9H8K7 445 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 KCTD5Q9NXV2 234 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 ZFR2Q9UPR6 939 aaKnown RBP17.04■□□□□ 0.32
USP39-211ENST00000465282 CACNA1EQ15878 2313 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 LAMA1P25391 3075 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 ZNF292O60281 2723 aa17.04■□□□□ 0.32
USP39-211ENST00000465282 GPR179Q6PRD1 2367 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 RIF1Q5UIP0 2472 aaKnown RBP17.03■□□□□ 0.32
USP39-211ENST00000465282 A0A0J9YYE9 177 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 GOLGA6L10A0A0M3HER8 536 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 GOLGA6CA6NDK9 693 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 GOLGA6BA6NDN3 693 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 ANKRD66B4E2M5 251 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 PRAMEF26H0Y7S4 382 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 BCAT2O15382 392 aaPredicted RBP17.03■□□□□ 0.32
USP39-211ENST00000465282 TM7SF2O76062 418 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 PRLP01236 227 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 TRBC1P01850 177 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms