RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 LMNTD2Q8IXW0 634 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 FIBCD1Q8N539 461 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.89□□□□□ -0.83
ATF3-207ENST00000464547 PNPLA1Q8N8W4 532 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 OR6P1Q8NGX9 317 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 GABPB2Q8TAK5 448 aaPredicted RBP9.89□□□□□ -0.83
ATF3-207ENST00000464547 PIWIL2Q8TC59 973 aaKnown RBP9.89□□□□□ -0.83
ATF3-207ENST00000464547 BRSK1Q8TDC3 778 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 PPP4R1Q8TF05 950 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 PEX13Q92968 403 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 NXNL1Q96CM4 212 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 SLC7A6OSQ96CW6 309 aaPredicted RBP9.89□□□□□ -0.83
ATF3-207ENST00000464547 TMA16Q96EY4 203 aaKnown RBP9.89□□□□□ -0.83
ATF3-207ENST00000464547 NSL1Q96IY1 281 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 DNAJC1Q96KC8 554 aaKnown RBP9.89□□□□□ -0.83
ATF3-207ENST00000464547 EXOC2Q96KP1 924 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 TBATAQ96M53 351 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 TMEM237Q96Q45 408 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 NUDCD1Q96RS6 583 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 NDNQ99608 321 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 OLFM1Q99784 485 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 TUBB6Q9BUF5 446 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 GATA5Q9BWX5 397 aaPredicted RBP9.89□□□□□ -0.83
ATF3-207ENST00000464547 WWP1Q9H0M0 922 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 SUDS3Q9H7L9 328 aaPredicted RBP9.89□□□□□ -0.83
ATF3-207ENST00000464547 IGSF5Q9NSI5 407 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 OXSMQ9NWU1 459 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.89□□□□□ -0.83
ATF3-207ENST00000464547 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.89□□□□□ -0.83
ATF3-207ENST00000464547 CPSF2Q9P2I0 782 aaKnown RBP9.89□□□□□ -0.83
ATF3-207ENST00000464547 LHX3Q9UBR4 397 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 LNPEPQ9UIQ6 1025 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 SSX2IPQ9Y2D8 614 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 SPO11Q9Y5K1 396 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 OR51B4Q9Y5P0 310 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 CPQQ9Y646 472 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 ARL5AQ9Y689 179 aa9.89□□□□□ -0.83
ATF3-207ENST00000464547 CHD5Q8TDI0 1954 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 PTPRSQ13332 1948 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 PLXNA4Q9HCM2 1894 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 ZBBXA8MT70 800 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 H0Y626 953 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 TK2O00142 265 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 NRG2O14511 850 aaPredicted RBP9.88□□□□□ -0.83
ATF3-207ENST00000464547 TRAFD1O14545 582 aaPredicted RBP9.88□□□□□ -0.83
ATF3-207ENST00000464547 ZNF195O14628 629 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 HNRNPCL1O60812 293 aaKnown RBP9.88□□□□□ -0.83
ATF3-207ENST00000464547 CCDC22O60826 627 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 TMCC1O94876 653 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 GOT2P00505 430 aaKnown RBP9.88□□□□□ -0.83
ATF3-207ENST00000464547 PRLP01236 227 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 LRG1P02750 347 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 PIRTP0C851 137 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 ALOX15P16050 662 aaPredicted RBP9.88□□□□□ -0.83
ATF3-207ENST00000464547 CSKP41240 450 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 GLRBP48167 497 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 IDH3AP50213 366 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 SCNN1BP51168 640 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 SLC12A2P55011 1212 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 PRAMEP78395 509 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 NSUN2Q08J23 767 aaKnown RBP eCLIP9.88□□□□□ -0.83
ATF3-207ENST00000464547 TUBB3Q13509 450 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 TSNAXIP1Q2TAA8 658 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 NCEH1Q6PIU2 408 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 LINGO4Q6UY18 593 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 CHRDL2Q6WN34 429 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 GAREM2Q75VX8 874 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 SPNS2Q8IVW8 549 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 WDR75Q8IWA0 830 aaKnown RBP9.88□□□□□ -0.83
ATF3-207ENST00000464547 FSTL5Q8N475 847 aaPredicted RBP9.88□□□□□ -0.83
ATF3-207ENST00000464547 SPATA6LQ8N4H0 392 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 KLHL23Q8NBE8 558 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 OR13C4Q8NGS5 318 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 GPR150Q8NGU9 434 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 HEXDCQ8WVB3 486 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 SREK1Q8WXA9 508 aaKnown RBP9.88□□□□□ -0.83
ATF3-207ENST00000464547 MRPS31Q92665 395 aaKnown RBP9.88□□□□□ -0.83
ATF3-207ENST00000464547 UTP4Q969X6 686 aaKnown RBP9.88□□□□□ -0.83
ATF3-207ENST00000464547 ALG14Q96F25 216 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 TSPAN17Q96FV3 270 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 RAB3IPQ96QF0 476 aaPredicted RBP9.88□□□□□ -0.83
ATF3-207ENST00000464547 EBF4Q9BQW3 602 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 FEM1AQ9BSK4 669 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 NMUR2Q9GZQ4 415 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 DNAJC28Q9NX36 388 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 STK39Q9UEW8 545 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 RAI2Q9Y5P3 530 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 MIA3Q5JRA6 1907 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 ANAPC1Q9H1A4 1944 aa9.88□□□□□ -0.83
ATF3-207ENST00000464547 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.87□□□□□ -0.83
ATF3-207ENST00000464547 CAPN14A8MX76 684 aa9.87□□□□□ -0.83
ATF3-207ENST00000464547 CD3EAPO15446 510 aaKnown RBP9.87□□□□□ -0.83
ATF3-207ENST00000464547 DLX3O60479 287 aa9.87□□□□□ -0.83
ATF3-207ENST00000464547 WISP3O95389 354 aaPredicted RBP9.87□□□□□ -0.83
ATF3-207ENST00000464547 CRTAMO95727 393 aa9.87□□□□□ -0.83
ATF3-207ENST00000464547 HSPA4LO95757 839 aa9.87□□□□□ -0.83
ATF3-207ENST00000464547 GLP2RO95838 553 aa9.87□□□□□ -0.83
ATF3-207ENST00000464547 C1RP00736 705 aa9.87□□□□□ -0.83
ATF3-207ENST00000464547 FGBP02675 491 aa9.87□□□□□ -0.83
ATF3-207ENST00000464547 C8AP07357 584 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms