RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 OR9Q1Q8NGQ5 310 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 DQX1Q8TE96 717 aaKnown RBP9.13□□□□□ -0.95
HPS4-208ENST00000464362 LRTOMTQ8WZ04 291 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 DLG3Q92796 817 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 SLC7A6OSQ96CW6 309 aaPredicted RBP9.13□□□□□ -0.95
HPS4-208ENST00000464362 PIDD1Q9HB75 910 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 PIGVQ9NUD9 493 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 PLK2Q9NYY3 685 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 TRPM5Q9NZQ8 1165 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 POLG2Q9UHN1 485 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 PPP2R3BQ9Y5P8 575 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 A0A0J9YYE9 177 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 LRATO95237 230 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 RAD23AP54725 363 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 POM121L1PQ3SYA9 428 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 LDLRAP1Q5SW96 308 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 TMEM63BQ5T3F8 832 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 TPGS1Q6ZTW0 290 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 OR56A4Q8NGH8 313 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 STAG3L4Q8TBR4 150 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 RTKNQ9BST9 563 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 TXNRD2Q9NNW7 524 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 TLR8Q9NR97 1041 aaKnown RBP9.13□□□□□ -0.95
HPS4-208ENST00000464362 UBA2Q9UBT2 640 aaPredicted RBP9.13□□□□□ -0.95
HPS4-208ENST00000464362 VPS9D1Q9Y2B5 631 aa9.13□□□□□ -0.95
HPS4-208ENST00000464362 TAF1P21675 1872 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 COL18A1P39060 1754 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 CFAP99D6REC4 459 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 AZIN1O14977 448 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 C22orf31O95567 290 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 STAU1O95793 577 aaKnown RBP9.12□□□□□ -0.95
HPS4-208ENST00000464362 ALDH2P05091 517 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 DLDP09622 509 aaKnown RBP9.12□□□□□ -0.95
HPS4-208ENST00000464362 NCK1P16333 377 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 MAGP20916 626 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 NR1H2P55055 460 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 GSCP56915 257 aaPredicted RBP9.12□□□□□ -0.95
HPS4-208ENST00000464362 IL2P60568 153 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 RPL38P63173 70 aaKnown RBP9.12□□□□□ -0.95
HPS4-208ENST00000464362 MSLNQ13421 630 aaPredicted RBP9.12□□□□□ -0.95
HPS4-208ENST00000464362 PAOXQ6QHF9 649 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 CCDC103Q8IW40 242 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 ZCCHC7Q8N3Z6 543 aaKnown RBP9.12□□□□□ -0.95
HPS4-208ENST00000464362 HEXDCQ8WVB3 486 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 C9orf16Q9BUW7 83 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 ADGRE3Q9BY15 652 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 HAPLN2Q9GZV7 340 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 TMEM165Q9HC07 324 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 COMMD8Q9NX08 183 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 C6orf203Q9P0P8 240 aaPredicted RBP9.12□□□□□ -0.95
HPS4-208ENST00000464362 GRIN3BO60391 1043 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 NEK2P51955 445 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 C21orf59P57076 290 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 KCNJ11Q14654 390 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 DEPDC1Q5TB30 811 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 UGT3A1Q6NUS8 523 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 CNSTQ6PJW8 725 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 TAC4Q86UU9 113 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 PLD6Q8N2A8 252 aaKnown RBP9.12□□□□□ -0.95
HPS4-208ENST00000464362 ZNF276Q8N554 614 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 VPS37AQ8NEZ2 397 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 OR9I1Q8NGQ6 314 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 GTF3C2Q8WUA4 911 aaPredicted RBP9.12□□□□□ -0.95
HPS4-208ENST00000464362 RSPH1Q8WYR4 309 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 MED8Q96G25 268 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 MIPEPQ99797 713 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 CIPCQ9C0C6 399 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 DAPK2Q9UIK4 370 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 INVSQ9Y283 1065 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 FARP1Q9Y4F1 1045 aaPredicted RBP9.12□□□□□ -0.95
HPS4-208ENST00000464362 PCDHB9Q9Y5E1 797 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 PARP4Q9UKK3 1724 aaKnown RBP9.12□□□□□ -0.95
HPS4-208ENST00000464362 A0A087X1B8 175 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 DPYSL4O14531 572 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 WDR47O94967 919 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 CES1P23141 567 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 ICAM3P32942 547 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 PTPN9P43378 593 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 PRKAA2P54646 552 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 ZNF252P-AS1Q0IIN9 211 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 MOGSQ13724 837 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 STARD3Q14849 445 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 PLEKHG4Q58EX7 1191 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 DET1Q7L5Y6 550 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 TP53INP2Q8IXH6 220 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 ELMOD1Q8N336 334 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 CBR4Q8N4T8 237 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 PQLC3Q8N755 202 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 FBXO27Q8NI29 283 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 OSCP1Q8WVF1 389 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 FOPNLQ96NB1 174 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 GORASP1Q9BQQ3 440 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 TXLNGYQ9BZA5 131 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 FBXO44Q9H4M3 255 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 PRPF19Q9UMS4 504 aaKnown RBP9.12□□□□□ -0.95
HPS4-208ENST00000464362 MTF2Q9Y483 593 aaPredicted RBP9.12□□□□□ -0.95
HPS4-208ENST00000464362 PCDHB12Q9Y5F1 795 aa9.12□□□□□ -0.95
HPS4-208ENST00000464362 SMIM31A0A1B0GVY4 71 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 TMEM114B3SHH9 223 aa9.11□□□□□ -0.95
HPS4-208ENST00000464362 ADCY6O43306 1168 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms