RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 METTL12A8MUP2 240 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 MEI4A8MW99 385 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 C10orf142B7Z368 130 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 INSIG1O15503 277 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 AP1G1O43747 822 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 ADRB3P13945 408 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 GKP32189 559 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 NUDT1P36639 197 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 PTGER3P43115 390 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 CCR5P51681 352 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 IFFO1Q0D2I5 559 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 NOMO1Q15155 1222 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 LLGL1Q15334 1064 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 CFAP58Q5T655 872 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 DCAF12L1Q5VU92 463 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 PEAR1Q5VY43 1037 aaPredicted RBP11.19□□□□□ -0.62
APTX-209ENST00000460940 AP1ARQ63HQ0 302 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 KIAA0895LQ68EN5 471 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 NEK5Q6P3R8 708 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 FBXL19Q6PCT2 694 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 NCEH1Q6PIU2 408 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 ASCL5Q7RTU5 278 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 SLC41A1Q8IVJ1 513 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 PGBD5Q8N414 524 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 TTC13Q8NBP0 860 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 ZNF483Q8TF39 744 aaPredicted RBP11.19□□□□□ -0.62
APTX-209ENST00000460940 AENQ8WTP8 325 aaKnown RBP11.19□□□□□ -0.62
APTX-209ENST00000460940 SPOCK2Q92563 424 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 KLHL32Q96NJ5 620 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 IL12RB2Q99665 862 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 FERMT1Q9BQL6 677 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 NT5MQ9NPB1 228 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 SCUBE2Q9NQ36 999 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 SPATS2LQ9NUQ6 558 aaKnown RBP11.19□□□□□ -0.62
APTX-209ENST00000460940 RBM22Q9NW64 420 aaKnown RBP eCLIP11.19□□□□□ -0.62
APTX-209ENST00000460940 ETAA1Q9NY74 926 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.19□□□□□ -0.62
APTX-209ENST00000460940 FAM186AA6NE01 2351 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 VPS13AQ96RL7 3174 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 ZNF292O60281 2723 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 FOXD2O60548 495 aaPredicted RBP11.18□□□□□ -0.62
APTX-209ENST00000460940 GFRA3O60609 400 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 SCNN1BP51168 640 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 CREB5Q02930 508 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 BCL2L1Q07817 233 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 ZNF211Q13398 564 aaPredicted RBP11.18□□□□□ -0.62
APTX-209ENST00000460940 SLC45A4Q5BKX6 768 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 CCNI2Q6ZMN8 369 aaPredicted RBP11.18□□□□□ -0.62
APTX-209ENST00000460940 ARMCX6Q7L4S7 300 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 TRIM69Q86WT6 500 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 SYT12Q8IV01 421 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 CDKL3Q8IVW4 592 aaPredicted RBP11.18□□□□□ -0.62
APTX-209ENST00000460940 ACTL9Q8TC94 416 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 DNASE2BQ8WZ79 361 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 HAUS1Q96CS2 278 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 HERPUD2Q9BSE4 406 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 SUV39H2Q9H5I1 410 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 C6orf106Q9H6K1 298 aaPredicted RBP11.18□□□□□ -0.62
APTX-209ENST00000460940 SLC40A1Q9NP59 571 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 SAE1Q9UBE0 346 aaPredicted RBP11.18□□□□□ -0.62
APTX-209ENST00000460940 SUSD2Q9UGT4 822 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 ATP8A1Q9Y2Q0 1164 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 ABCA7Q8IZY2 2146 aa11.18□□□□□ -0.62
APTX-209ENST00000460940 KCNK1O00180 336 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 RNF103O00237 685 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 PLK4O00444 970 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 PIGNO95427 931 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 HLA-DQB2P05538 268 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 CA4P22748 312 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 MPLP40238 635 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 TAS2R38P59533 333 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 OTUD4Q01804 1114 aaKnown RBP11.17□□□□□ -0.62
APTX-209ENST00000460940 ZBTB17Q13105 803 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 KLF1Q13351 362 aaPredicted RBP11.17□□□□□ -0.62
APTX-209ENST00000460940 ALS2CLQ60I27 953 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 PARP9Q8IXQ6 854 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 ECHDC3Q96DC8 303 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 VAT1Q99536 393 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 HINFPQ9BQA5 517 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 TLR10Q9BXR5 811 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 FRMD8P1Q9BZ68 369 aaPredicted RBP11.17□□□□□ -0.62
APTX-209ENST00000460940 NOD2Q9HC29 1040 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 SLC24A3Q9HC58 644 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 VPS45Q9NRW7 570 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 HOMER3Q9NSC5 361 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 PILRBQ9UKJ0 227 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 THADAQ6YHU6 1953 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 TBC1D3DA0A087WVF3 549 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 TBC1D3IA0A087WXS9 549 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 TBC1D3EA0A087X179 549 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 TBC1D3KA0A087X1G2 549 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 TBC1D3FA6NER0 549 aaPredicted RBP11.17□□□□□ -0.62
APTX-209ENST00000460940 FAM47DPA6NHR8 397 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 UPK3BL1B0FP48 263 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 TBC1D3LB9A6J9 549 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 UPK3BL2E5RIL1 263 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 TRAFD1O14545 582 aaPredicted RBP11.17□□□□□ -0.62
APTX-209ENST00000460940 KCNK3O14649 394 aa11.17□□□□□ -0.62
APTX-209ENST00000460940 HTRA2O43464 458 aaPredicted RBP11.17□□□□□ -0.62
APTX-209ENST00000460940 LATO43561 262 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms