RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SERPINA6P08185 405 aa15.52■□□□□ 0.07
LMNB1-203ENST00000460265 FGF3P11487 239 aaPredicted RBP15.52■□□□□ 0.07
LMNB1-203ENST00000460265 SP3Q02447 781 aa15.52■□□□□ 0.07
LMNB1-203ENST00000460265 GALNT2Q10471 571 aa15.52■□□□□ 0.07
LMNB1-203ENST00000460265 PTPRCAPQ14761 206 aa15.52■□□□□ 0.07
LMNB1-203ENST00000460265 ARL13AQ5H913 290 aaPredicted RBP15.52■□□□□ 0.07
LMNB1-203ENST00000460265 VARS2Q5ST30 1063 aaKnown RBP15.52■□□□□ 0.07
LMNB1-203ENST00000460265 MBLAC2Q68D91 279 aa15.52■□□□□ 0.07
LMNB1-203ENST00000460265 DBF4BQ8NFT6 615 aa15.52■□□□□ 0.07
LMNB1-203ENST00000460265 HDAC10Q969S8 669 aa15.52■□□□□ 0.07
LMNB1-203ENST00000460265 HMCESQ96FZ2 354 aa15.52■□□□□ 0.07
LMNB1-203ENST00000460265 CYP2S1Q96SQ9 504 aa15.52■□□□□ 0.07
LMNB1-203ENST00000460265 SEMA3CQ99985 751 aa15.52■□□□□ 0.07
LMNB1-203ENST00000460265 LIN28AQ9H9Z2 209 aaKnown RBP15.52■□□□□ 0.07
LMNB1-203ENST00000460265 EIF2B3Q9NR50 452 aaKnown RBP15.52■□□□□ 0.07
LMNB1-203ENST00000460265 HCSTQ9UBK5 93 aa15.52■□□□□ 0.07
LMNB1-203ENST00000460265 Q9Y3F1 56 aa15.52■□□□□ 0.07
LMNB1-203ENST00000460265 HEMK1Q9Y5R4 338 aaPredicted RBP15.52■□□□□ 0.07
LMNB1-203ENST00000460265 HS3ST4Q9Y661 456 aa15.52■□□□□ 0.07
LMNB1-203ENST00000460265 CAPN8A6NHC0 703 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 UNCXA6NJT0 531 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 TBKBP1A7MCY6 615 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 CA12O43570 354 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 MPOP05164 745 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 CASP2P42575 452 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 SLC12A1Q13621 1099 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 XKR4Q5GH76 650 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 TMEM198Q66K66 360 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 SLC24A5Q71RS6 500 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 MON1AQ86VX9 555 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 LGI2Q8N0V4 545 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 FSTL5Q8N475 847 aaPredicted RBP15.51■□□□□ 0.07
LMNB1-203ENST00000460265 TRIML2Q8N7C3 387 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 ATP6V0D2Q8N8Y2 350 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 RNF186Q9NXI6 227 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 SSX2IPQ9Y2D8 614 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 MYOCOSA0A1B0GUC4 107 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 NCF1BA6NI72 391 aaPredicted RBP15.51■□□□□ 0.07
LMNB1-203ENST00000460265 NCF1CA8MVU1 366 aaPredicted RBP15.51■□□□□ 0.07
LMNB1-203ENST00000460265 NCF1P14598 390 aaPredicted RBP15.51■□□□□ 0.07
LMNB1-203ENST00000460265 DNAJB2P25686 324 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 IDH3AP50213 366 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 PKNOX1P55347 436 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 TAS2R39P59534 338 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 GRM2Q14416 872 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 GALNT3Q14435 633 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 TMCO4Q5TGY1 634 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 CES4AQ5XG92 561 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 TIGD7Q6NT04 549 aaPredicted RBP15.51■□□□□ 0.07
LMNB1-203ENST00000460265 CNSTQ6PJW8 725 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 PHTF2Q8N3S3 785 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 OR52K2Q8NGK3 314 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 DTNAQ9Y4J8 743 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 CBX4O00257 560 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 CBFA2T3O75081 653 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 TFPTP0C1Z6 253 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 AIF1P55008 147 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 NIPAL4Q0D2K0 466 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 MSLNQ13421 630 aaPredicted RBP15.51■□□□□ 0.07
LMNB1-203ENST00000460265 SLC9B1Q4ZJI4 515 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 PDCD4Q53EL6 469 aaKnown RBP15.51■□□□□ 0.07
LMNB1-203ENST00000460265 ALFQ53S48 1182 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 PAOXQ6QHF9 649 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 C16orf59Q7L2K0 433 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 SNX32Q86XE0 403 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 CROCCP3Q8IVE0 287 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 BBS5Q8N3I7 341 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 ZFRQ96KR1 1074 aaKnown RBP15.51■□□□□ 0.07
LMNB1-203ENST00000460265 FBXO44Q9H4M3 255 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 TRPC7Q9HCX4 862 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 TBC1D13Q9NVG8 400 aa15.51■□□□□ 0.07
LMNB1-203ENST00000460265 ZNF487B1APH4 448 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 NDUFB5O43674 189 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 MAGEA6P43360 314 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 ACLYP53396 1101 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 FAM83EQ2M2I3 478 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 THOC7Q6I9Y2 204 aaKnown RBP15.5■□□□□ 0.07
LMNB1-203ENST00000460265 UGT2A3Q6UWM9 527 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 LZTR1Q8N653 840 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 RTP3Q9BQQ7 232 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 RHOJQ9H4E5 214 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 IL1RL2Q9HB29 575 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 CASS4Q9NQ75 786 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 ENTPD7Q9NQZ7 604 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 ADAMTS6Q9UKP5 1117 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 EMCNQ9ULC0 261 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 TRIM17Q9Y577 477 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 ZCWPW2A0A1B0GU75 182 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 TMEM233B4DJY2 109 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 FBP2O00757 339 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 AURKAO14965 403 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 MATN3O15232 486 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 GSTT2P0CG29 244 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 GSTT2BP0CG30 244 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 GFAPP14136 432 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 SLC5A2P31639 672 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 MAGEA3P43357 314 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 SERPINH1P50454 418 aaKnown RBP15.5■□□□□ 0.07
LMNB1-203ENST00000460265 CDH13P55290 713 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 RELAQ04206 551 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms