RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 NSMCE1Q8WV22 266 aa10.09□□□□□ -0.79
HDLBP-228ENST00000459788 MYOCQ99972 504 aa10.09□□□□□ -0.79
HDLBP-228ENST00000459788 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.09□□□□□ -0.79
HDLBP-228ENST00000459788 TRIM7Q9C029 511 aa10.09□□□□□ -0.79
HDLBP-228ENST00000459788 PCDH12Q9NPG4 1184 aa10.09□□□□□ -0.79
HDLBP-228ENST00000459788 GPATCH2LQ9NWQ4 482 aa10.09□□□□□ -0.79
HDLBP-228ENST00000459788 MYO1AQ9UBC5 1043 aa10.09□□□□□ -0.79
HDLBP-228ENST00000459788 NENFQ9UMX5 172 aa10.09□□□□□ -0.79
HDLBP-228ENST00000459788 CLCA2Q9UQC9 943 aa10.09□□□□□ -0.79
HDLBP-228ENST00000459788 COL27A1Q8IZC6 1860 aaPredicted RBP10.08□□□□□ -0.8
HDLBP-228ENST00000459788 IGSF10Q6WRI0 2623 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 A0A087WV48 116 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 A0A087X0T9 212 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 ZNF487B1APH4 448 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 PSMD11O00231 422 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 DFFAO00273 331 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 TRAFD1O14545 582 aaPredicted RBP10.08□□□□□ -0.8
HDLBP-228ENST00000459788 TNFRSF10CO14798 259 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 INSIG1O15503 277 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 HTRA2O43464 458 aaPredicted RBP10.08□□□□□ -0.8
HDLBP-228ENST00000459788 BUB1BO60566 1050 aaPredicted RBP10.08□□□□□ -0.8
HDLBP-228ENST00000459788 MMP20O60882 483 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 SDC3O75056 442 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 KRT7P08729 469 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 ALPIP09923 528 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 H2AFZP0C0S5 128 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 FAM228BP0C875 321 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 RARAP10276 462 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 KRT10P13645 584 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 JUNDP17535 347 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 CR2P20023 1033 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 KELP23276 732 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 IL1R2P27930 398 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 TEAD1P28347 426 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 MAN1A1P33908 653 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 IGFALSP35858 605 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 SLC25A11Q02978 314 aaKnown RBP10.08□□□□□ -0.8
HDLBP-228ENST00000459788 EIF2B5Q13144 721 aaKnown RBP10.08□□□□□ -0.8
HDLBP-228ENST00000459788 PDK2Q15119 407 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 SLC18A3Q16572 532 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 ZSCAN23Q3MJ62 389 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 CDCP2Q5VXM1 449 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 SPECC1LQ69YQ0 1117 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 H2AFVQ71UI9 128 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 DPPA4Q7L190 304 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 MAP7D3Q8IWC1 876 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 LSMEM2Q8N112 164 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 NPWQ8N729 165 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 TSEN2Q8NCE0 465 aaKnown RBP10.08□□□□□ -0.8
HDLBP-228ENST00000459788 OR6C4Q8NGE1 309 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 OR8K1Q8NGG5 319 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 SCG3Q8WXD2 468 aaKnown RBP10.08□□□□□ -0.8
HDLBP-228ENST00000459788 NAT6Q93015 286 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 CELF6Q96J87 481 aaKnown RBP10.08□□□□□ -0.8
HDLBP-228ENST00000459788 APOLD1Q96LR9 279 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 CSPG4P5Q96PW8 444 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 NUDCD1Q96RS6 583 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 DNAJC7Q99615 494 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 IL12RB2Q99665 862 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 MGME1Q9BQP7 344 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 NUP85Q9BW27 656 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 BOCQ9BWV1 1114 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 SLC13A1Q9BZW2 595 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 THAP2Q9H0W7 228 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 PCDH18Q9HCL0 1135 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.08□□□□□ -0.8
HDLBP-228ENST00000459788 UCKL1Q9NWZ5 548 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 IFNKQ9P0W0 207 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 GGT7Q9UJ14 662 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 ANAPC7Q9UJX3 599 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 ITM2BQ9Y287 266 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 DGKBQ9Y6T7 804 aa10.08□□□□□ -0.8
HDLBP-228ENST00000459788 EME2A4GXA9 379 aaPredicted RBP10.07□□□□□ -0.8
HDLBP-228ENST00000459788 PDE2AO00408 941 aaPredicted RBP10.07□□□□□ -0.8
HDLBP-228ENST00000459788 MAFKO60675 156 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 TCEA3O75764 348 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 RASGRP1O95267 797 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 PIGNO95427 931 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 PEX11BO96011 259 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 TPM1P09493 284 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 C6P13671 934 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 CASP14P31944 242 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 TRIM23P36406 574 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 EIF4A3P38919 411 aaKnown RBP10.07□□□□□ -0.8
HDLBP-228ENST00000459788 MLLT3P42568 568 aaPredicted RBP10.07□□□□□ -0.8
HDLBP-228ENST00000459788 LIG3P49916 1009 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 KIAA1024LP59773 190 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 INSM1Q01101 510 aaPredicted RBP10.07□□□□□ -0.8
HDLBP-228ENST00000459788 PPARDQ03181 441 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 ZNF235Q14590 738 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 NFATC4Q14934 902 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 PAFAH1B3Q15102 231 aaKnown RBP10.07□□□□□ -0.8
HDLBP-228ENST00000459788 IRF4Q15306 451 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 ELOCQ15369 112 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 TSR1Q2NL82 804 aaKnown RBP10.07□□□□□ -0.8
HDLBP-228ENST00000459788 WSCD2Q2TBF2 565 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 CCDC122Q5T0U0 273 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 ALG1LQ6GMV1 187 aa10.07□□□□□ -0.8
HDLBP-228ENST00000459788 TIGD7Q6NT04 549 aaPredicted RBP10.07□□□□□ -0.8
HDLBP-228ENST00000459788 IGF2-ASQ6U949 168 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms