RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 AMACRQ9UHK6 382 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 PCDHGA1Q9Y5H4 931 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 LRRD1A4D1F6 860 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 SRRM3A6NNA2 597 aaPredicted RBP17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 ENC1O14682 589 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 LZTS3O60299 673 aaPredicted RBP17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 CD48P09326 243 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 ZFXP17010 805 aaPredicted RBP17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 KDELR1P24390 212 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 GARSP41250 739 aaKnown RBP17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 MAGEA1P43355 309 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 NOP2P46087 812 aaKnown RBP17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 RGRP47804 291 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 ZNF75DP51815 510 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 GALNT2Q10471 571 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 PDE1CQ14123 709 aaPredicted RBP17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 LRRC14Q15048 493 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 NCBP2-AS2Q69YL0 99 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 CCNI2Q6ZMN8 369 aaPredicted RBP17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 TMPRSS7Q7RTY8 843 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 RHOT1Q8IXI2 618 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 EID2Q8N6I1 236 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 ATL2Q8NHH9 583 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 PCDH19Q8TAB3 1148 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 BTN2A2Q8WVV5 523 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 FATE1Q969F0 183 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 FAF2Q96CS3 445 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 ECHDC3Q96DC8 303 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 CALR3Q96L12 384 aaKnown RBP17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 BMFQ96LC9 184 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 PANX2Q96RD6 677 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 MGME1Q9BQP7 344 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 POLR1EQ9GZS1 481 aaKnown RBP17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 DNAJC28Q9NX36 388 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 KCTD5Q9NXV2 234 aa17.65■□□□□ 0.42
SCARNA2-201ENST00000458748 PLXNB3Q9ULL4 1909 aa17.64■□□□□ 0.42
SCARNA2-201ENST00000458748 SPTY2D1-AS1A0A0U1RR47 76 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 POM121BA6NF01 834 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 MATN3O15232 486 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 RAD51BO15315 384 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 SPINT1O43278 529 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 SPOPO43791 374 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 MFSD11O43934 449 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 CA4P22748 312 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 CCNCP24863 283 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 MMP12P39900 470 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 LIG3P49916 1009 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 ITKQ08881 620 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 ATP13A4Q4VNC1 1196 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 TP53INP2Q8IXH6 220 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 PDCD6IPQ8WUM4 868 aaKnown RBP17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 SPOCK2Q92563 424 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 CENPTQ96BT3 561 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 DUSP23Q9BVJ7 150 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 RBSNQ9H1K0 784 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 ANKRD36A6QL64 1941 aa17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 ARID1BQ8NFD5 2236 aaPredicted RBP17.64■□□□□ 0.41
SCARNA2-201ENST00000458748 GOLGA8CPA6NN73 597 aa17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 SDC3O75056 442 aa17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 LCA5LO95447 670 aa17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 PEX11BO96011 259 aa17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 ELFN1P0C7U0 828 aa17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 CYP2A6P11509 494 aaPredicted RBP17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 C6P13671 934 aa17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 DGKAP23743 735 aa17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 HTR1BP28222 390 aa17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 PFN3P60673 137 aa17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 ZNF211Q13398 564 aaPredicted RBP17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 ILKQ13418 452 aa17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 AGERQ15109 404 aa17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 DPPA4Q7L190 304 aa17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 BZW1Q7L1Q6 419 aaKnown RBP17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 TMTC1Q8IUR5 882 aa17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 SLC22A18ASQ8N1D0 253 aa17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 TSGA13Q96PP4 275 aa17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 RNF157Q96PX1 679 aa17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 FAM208BQ5VWN6 2430 aa17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 TDRD6O60522 2096 aaKnown RBP17.63■□□□□ 0.41
SCARNA2-201ENST00000458748 TRAFD1O14545 582 aaPredicted RBP17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 MUSKO15146 869 aa17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 HTRA2O43464 458 aaPredicted RBP17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 CPP00450 1065 aa17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 CSF2P04141 144 aa17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 KRT1P04264 644 aa17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 NME1P15531 152 aaKnown RBP17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 CR2P20023 1033 aa17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 PEX5P50542 639 aa17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 BLKP51451 505 aa17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 HADHBP55084 474 aaKnown RBP17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 FZD2Q14332 565 aa17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 SMAD1Q15797 465 aaKnown RBP17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 SLC25A45Q8N413 288 aa17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 TEX26Q8N6G2 289 aa17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 CCNYQ8ND76 341 aa17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 NOD2Q9HC29 1040 aa17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 NT5MQ9NPB1 228 aa17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 NCKIPSDQ9NZQ3 722 aa17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 PHTF1Q9UMS5 762 aa17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.62■□□□□ 0.41
SCARNA2-201ENST00000458748 PCDHA13Q9Y5I0 950 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms