RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.02□□□□□ -0.97
VPS50-207ENST00000458530 FAM159BA6NKW6 160 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 INSIG1O15503 277 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 NARSO43776 548 aaKnown RBP9.02□□□□□ -0.97
VPS50-207ENST00000458530 ATP9BO43861 1147 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 USP12O75317 370 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 TMCC1O94876 653 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 PRAMEF12O95522 483 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 NFATC1O95644 943 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 NDST3O95803 873 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 IGSF6O95976 241 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 PENKP01210 267 aaPredicted RBP9.02□□□□□ -0.97
VPS50-207ENST00000458530 TGM1P22735 817 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 GRIA1P42261 906 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 GCGRP47871 477 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 MAXP61244 160 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 RHOAP61586 193 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 NTHL1P78549 312 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 ZXDBP98169 803 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 CDK18Q07002 472 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 DNAJC3Q13217 504 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 MTM1Q13496 603 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 UGP2Q16851 508 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 RSPO4Q2I0M5 234 aaPredicted RBP9.02□□□□□ -0.97
VPS50-207ENST00000458530 PLEKHG6Q3KR16 790 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 TNFAIP8L3Q5GJ75 292 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 ZC3H14Q6PJT7 736 aaKnown RBP9.02□□□□□ -0.97
VPS50-207ENST00000458530 TMC5Q6UXY8 1006 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 RANBP10Q6VN20 620 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 PRPF39Q86UA1 669 aaKnown RBP9.02□□□□□ -0.97
VPS50-207ENST00000458530 TMEM135Q86UB9 458 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 IGDCC3Q8IVU1 814 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 MPP5Q8N3R9 675 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 DCLK2Q8N568 766 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.02□□□□□ -0.97
VPS50-207ENST00000458530 PPM1NQ8N819 430 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 ARRDC2Q8TBH0 407 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 CALML6Q8TD86 181 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 WFIKKN2Q8TEU8 576 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 SMARCD2Q92925 531 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 PEX13Q92968 403 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 IRF7Q92985 503 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 TADA1Q96BN2 335 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 CERS2Q96G23 380 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 SRPK1Q96SB4 655 aaKnown RBP9.02□□□□□ -0.97
VPS50-207ENST00000458530 SELENOSQ9BQE4 189 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 DHRS4Q9BTZ2 278 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 KIFC1Q9BW19 673 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 CAPS2Q9BXY5 557 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 SMG9Q9H0W8 520 aaKnown RBP9.02□□□□□ -0.97
VPS50-207ENST00000458530 SSU72Q9NP77 194 aaKnown RBP9.02□□□□□ -0.97
VPS50-207ENST00000458530 PPANQ9NQ55 473 aaKnown RBP9.02□□□□□ -0.97
VPS50-207ENST00000458530 EURLQ9NYK6 297 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 NKIRAS1Q9NYS0 192 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 MOCS1Q9NZB8 636 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 ZFATQ9P243 1243 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 EPS15L1Q9UBC2 864 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 TBK1Q9UHD2 729 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 SLC8A2Q9UPR5 921 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 CCL26Q9Y258 94 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 TCAF1Q9Y4C2 921 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 OR51B4Q9Y5P0 310 aa9.02□□□□□ -0.97
VPS50-207ENST00000458530 CEP295Q9C0D2 2601 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 SRRM3A6NNA2 597 aaPredicted RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 NEDD8-MDP1E9PL57 170 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 SCAMP3O14828 347 aaKnown RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 ZMPSTE24O75844 475 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 PAPSS2O95340 614 aaPredicted RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 ADH1BP00325 375 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 MT-ND3P03897 115 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 SNRPAP09012 282 aaKnown RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 PABPC1P11940 636 aaKnown RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 GLULP15104 373 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 MZF1P28698 734 aaPredicted RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 NNMTP40261 264 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 HADHAP40939 763 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 CSNK1DP48730 415 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 SCNN1BP51168 640 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 CSE1LP55060 971 aaKnown RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 RPL26P61254 145 aaKnown RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 SNRPD1P62314 119 aaKnown RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 ARF5P84085 180 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 PDE1BQ01064 536 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 RAD51Q06609 339 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 NIPAL4Q0D2K0 466 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 LMAN2Q12907 356 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 SEPT6Q14141 434 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 GRM3Q14832 879 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 PDGFRLQ15198 375 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 SLC1A5Q15758 541 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 SEPT7Q16181 437 aaKnown RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 ZNF528Q3MIS6 628 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 PREPLQ4J6C6 727 aaPredicted RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 ANKRD20A4Q4UJ75 823 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 PITRM1Q5JRX3 1037 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 UBAP2Q5T6F2 1119 aaKnown RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 KIAA0930Q6ICG6 404 aaPredicted RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 PKN3Q6P5Z2 889 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 GET4Q7L5D6 327 aaPredicted RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 TRABD2AQ86V40 505 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms