RNA–Protein interactions for RNA: ENST00000457435.1

LINC01546-201, Transcript of long intergenic non-protein coding RNA 1546, humanhuman

TSL 2 BASIC

Gene LINC01546, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546-201ENST00000457435 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.79□□□□□ -1.8
LINC01546-201ENST00000457435 DDTLA6NHG4 134 aaPredicted RBP3.79□□□□□ -1.8
LINC01546-201ENST00000457435 LIPT2A6NK58 231 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 USP17L23D6RBM5 183 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 KIR2DS3K7RE56 304 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 LDLRAD4O15165 306 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 TIMM44O43615 452 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 SEC31AO94979 1220 aaKnown RBP3.79□□□□□ -1.8
LINC01546-201ENST00000457435 NDUFB8O95169 186 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 GAS8-AS1O95177 125 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 HEXAP06865 529 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 FGF2P09038 288 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 KRT10P13645 584 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 TNFRSF8P28908 595 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 MAPK4P31152 587 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 ICAM3P32942 547 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 TTKP33981 857 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 HOXD13P35453 343 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 PRAMEP78395 509 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 NUCB1Q02818 461 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 GAD2Q05329 585 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 PPATQ06203 517 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 FRG1Q14331 258 aaKnown RBP3.79□□□□□ -1.8
LINC01546-201ENST00000457435 CRYMQ14894 314 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 WTAPQ15007 396 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 CFAP58Q5T655 872 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 TBC1D9BQ66K14 1250 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 NCAPH2Q6IBW4 605 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 CAPRIN2Q6IMN6 1127 aaKnown RBP3.79□□□□□ -1.8
LINC01546-201ENST00000457435 CES5AQ6NT32 575 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 HMBOX1Q6NT76 420 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 TTI2Q6NXR4 508 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 NCEH1Q6PIU2 408 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 TBC1D26Q86UD7 250 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 TICAM2Q86XR7 235 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 ZDHHC23Q8IYP9 409 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 KIAA2013Q8IYS2 634 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 TMEM199Q8N511 208 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 NEK9Q8TD19 979 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 CREB3L4Q8TEY5 395 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 GTF3C6Q969F1 213 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 RNF183Q96D59 192 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 RSRC1Q96IZ7 334 aaKnown RBP3.79□□□□□ -1.8
LINC01546-201ENST00000457435 ZNF333Q96JL9 665 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 SIN3AQ96ST3 1273 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 MAP7D2Q96T17 732 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 MEIS3Q99687 375 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 SMARCAD1Q9H4L7 1026 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 PNRC2Q9NPJ4 139 aaKnown RBP3.79□□□□□ -1.8
LINC01546-201ENST00000457435 DECR2Q9NUI1 292 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 NCKIPSDQ9NZQ3 722 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 ADD3Q9UEY8 706 aaKnown RBP3.79□□□□□ -1.8
LINC01546-201ENST00000457435 TBC1D29Q9UFV1 150 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 HAO1Q9UJM8 370 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 AGO2Q9UKV8 859 aaKnown RBP3.79□□□□□ -1.8
LINC01546-201ENST00000457435 MKLN1Q9UL63 735 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 CARD8Q9Y2G2 431 aa3.79□□□□□ -1.8
LINC01546-201ENST00000457435 TTBK1Q5TCY1 1321 aaPredicted RBP3.78□□□□□ -1.8
LINC01546-201ENST00000457435 ADGRF5Q8IZF2 1346 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 TRBV5-7A0A0A0MS05 114 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 B4DLN1 442 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 SNAP23O00161 211 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 VILLO15195 856 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 BCAT2O15382 392 aaPredicted RBP3.78□□□□□ -1.8
LINC01546-201ENST00000457435 LIASO43766 372 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 ZC3H11AO75152 810 aaKnown RBP eCLIP3.78□□□□□ -1.8
LINC01546-201ENST00000457435 UNGP13051 313 aaPredicted RBP3.78□□□□□ -1.8
LINC01546-201ENST00000457435 RARGP13631 454 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 PLA2G2AP14555 144 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 CDH2P19022 906 aaPredicted RBP3.78□□□□□ -1.8
LINC01546-201ENST00000457435 PBX3P40426 434 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 ALDH7A1P49419 539 aaKnown RBP3.78□□□□□ -1.8
LINC01546-201ENST00000457435 MC1RQ01726 317 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 CREB5Q02930 508 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 SLC18A2Q05940 514 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 CHAF1BQ13112 559 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 RNPS1Q15287 305 aaKnown RBP3.78□□□□□ -1.8
LINC01546-201ENST00000457435 C6orf10Q5SRN2 563 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 TXNDC8Q6A555 127 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 TMEM154Q6P9G4 183 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 KLHL35Q6PF15 583 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 TSSK4Q6SA08 328 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 FAM83HQ6ZRV2 1179 aaPredicted RBP3.78□□□□□ -1.8
LINC01546-201ENST00000457435 KDELC2Q7Z4H8 507 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.78□□□□□ -1.8
LINC01546-201ENST00000457435 TRIM74Q86UV6 250 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 TRIM73Q86UV7 250 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 NR2C2APQ86WQ0 139 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 FAM217AQ8IXS0 508 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 CADM3Q8N126 398 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 ZCCHC9Q8N567 271 aaKnown RBP3.78□□□□□ -1.8
LINC01546-201ENST00000457435 LRRC57Q8N9N7 239 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 TMEM116Q8NCL8 245 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 SLC44A5Q8NCS7 719 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 C1orf131Q8NDD1 294 aaKnown RBP3.78□□□□□ -1.8
LINC01546-201ENST00000457435 OR4N2Q8NGD1 307 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 SNRNP27Q8WVK2 155 aaKnown RBP3.78□□□□□ -1.8
LINC01546-201ENST00000457435 DNASE2BQ8WZ79 361 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 PERPQ96FX8 193 aa3.78□□□□□ -1.8
LINC01546-201ENST00000457435 CALML4Q96GE6 196 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms