RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 MAP3K21Q5TCX8 1036 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 PIWIL4Q7Z3Z4 852 aaKnown RBP18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 PGBD5Q8N414 524 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 ATAD1Q8NBU5 361 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 GPR152Q8TDT2 470 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 PABPC5Q96DU9 382 aaKnown RBP18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 SGF29Q96ES7 293 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 MAELQ96JY0 434 aaKnown RBP18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 NDNQ99608 321 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 DDX50Q9BQ39 737 aaKnown RBP18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 VWA8A3KMH1 1905 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 THSD7BQ9C0I4 1608 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 SLC7A4O43246 635 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 TADA2AO75478 443 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 IGLV3-27P01718 113 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 CTXN3Q4LDR2 81 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 PPM1LQ5SGD2 360 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 TRIM67Q6ZTA4 783 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 DHDDSQ86SQ9 333 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 ECSITQ9BQ95 431 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 FAM192AQ9GZU8 254 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 POMKQ9H5K3 350 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 NCKIPSDQ9NZQ3 722 aa18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 G3BP2Q9UN86 482 aaKnown RBP18.5■□□□□ 0.55
SEMA3B-209ENST00000456560 LOC285095A0A1B0GVY8 99 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 WISP3O95389 354 aaPredicted RBP18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 ZCCHC18P0CG32 403 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 IL10RBQ08334 325 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 CSHL1Q14406 222 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 FAM83EQ2M2I3 478 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 TMEM198Q66K66 360 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 RAP1GAP2Q684P5 730 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 SETD3Q86TU7 594 aaPredicted RBP18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 SPNS2Q8IVW8 549 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 GABPB2Q8TAK5 448 aaPredicted RBP18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 SLC26A7Q8TE54 656 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 FBXO32Q969P5 355 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 CCDC124Q96CT7 223 aaKnown RBP18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 UBXN10Q96LJ8 280 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 OLA1Q9NTK5 396 aaKnown RBP18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 PRPF19Q9UMS4 504 aaKnown RBP18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 CASP8AP2Q9UKL3 1982 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 TTC24A2A3L6 582 aaPredicted RBP18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 NEMP2A6NFY4 417 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 TMEM233B4DJY2 109 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 LTA4HP09960 611 aaKnown RBP18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 ATXN1LP0C7T5 689 aaKnown RBP18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 CYLC2Q14093 348 aaPredicted RBP18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 SIRPB2Q5JXA9 342 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 TCHHL1Q5QJ38 904 aaPredicted RBP18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 HECTD2Q5U5R9 776 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 RASIP1Q5U651 963 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 CILP2Q8IUL8 1156 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 KYQ8NBH2 561 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 TSPAN17Q96FV3 270 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 CATSPER2Q96P56 530 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 MFSD1Q9H3U5 465 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 MARCH2Q9P0N8 246 aa18.49■□□□□ 0.55
SEMA3B-209ENST00000456560 ANKRD33BA6NCL7 494 aa18.48■□□□□ 0.55
SEMA3B-209ENST00000456560 SDHDO14521 159 aa18.48■□□□□ 0.55
SEMA3B-209ENST00000456560 AIM2O14862 343 aa18.48■□□□□ 0.55
SEMA3B-209ENST00000456560 SOAT2O75908 522 aa18.48■□□□□ 0.55
SEMA3B-209ENST00000456560 S1PR4O95977 384 aa18.48■□□□□ 0.55
SEMA3B-209ENST00000456560 ARSDP51689 593 aa18.48■□□□□ 0.55
SEMA3B-209ENST00000456560 SERINC3Q13530 473 aa18.48■□□□□ 0.55
SEMA3B-209ENST00000456560 PDCD2Q16342 344 aaPredicted RBP18.48■□□□□ 0.55
SEMA3B-209ENST00000456560 AGAP9Q5VTM2 703 aa18.48■□□□□ 0.55
SEMA3B-209ENST00000456560 C16orf89Q6UX73 402 aa18.48■□□□□ 0.55
SEMA3B-209ENST00000456560 RNF180Q86T96 592 aa18.48■□□□□ 0.55
SEMA3B-209ENST00000456560 KBTBD6Q86V97 674 aa18.48■□□□□ 0.55
SEMA3B-209ENST00000456560 FAM193BQ96PV7 902 aaPredicted RBP18.48■□□□□ 0.55
SEMA3B-209ENST00000456560 VPS28Q9UK41 221 aa18.48■□□□□ 0.55
SEMA3B-209ENST00000456560 OR6C75A6NL08 312 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 TRPC5OSA6NMA1 111 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 RTN3O95197 1032 aaPredicted RBP18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 KCNA5P22460 613 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 NUDT2P50583 147 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 CDC16Q13042 620 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 PARP15Q460N3 678 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 NXNQ6DKJ4 435 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 MIB1Q86YT6 1006 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 DSELQ8IZU8 1212 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 PNPLA1Q8N8W4 532 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 ZNF296Q8WUU4 475 aaPredicted RBP18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 CCDC126Q96EE4 140 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 ZBTB26Q9HCK0 441 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 UXTQ9UBK9 157 aaPredicted RBP18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 STK39Q9UEW8 545 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 ADAMTS6Q9UKP5 1117 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 VWA7Q9Y334 891 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 KLHL33A6NCF5 533 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 A8MT66 165 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 LDB2O43679 373 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 RBP1P09455 135 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 CCDC166P0CW27 439 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 TAF10Q12962 218 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 POLD3Q15054 466 aaPredicted RBP18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 ACAP2Q15057 778 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 SH2D4BQ5SQS7 431 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms