RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 UBA3Q8TBC4 463 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 METTL6Q8TCB7 284 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 PTCD2Q8WV60 388 aaKnown RBP5.03□□□□□ -1.6
PCDH9-203ENST00000456367 HDAC2Q92769 488 aaKnown RBP5.03□□□□□ -1.6
PCDH9-203ENST00000456367 PHF21BQ96EK2 531 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 TARS2Q9BW92 718 aaKnown RBP5.03□□□□□ -1.6
PCDH9-203ENST00000456367 SIK2Q9H0K1 926 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 FAM124BQ9H5Z6 455 aaPredicted RBP5.03□□□□□ -1.6
PCDH9-203ENST00000456367 RCOR3Q9P2K3 495 aaPredicted RBP5.03□□□□□ -1.6
PCDH9-203ENST00000456367 ABCG2Q9UNQ0 655 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 COG5Q9UP83 839 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 A0A1W2PPW3 197 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 SLC28A1O00337 649 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 MAGEB3O15480 346 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 NDUFB5O43674 189 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 TYROBPO43914 113 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 GRAP2O75791 330 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 SLITRK3O94933 977 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 CRYZL1O95825 349 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 CD72P21854 359 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 IL32P24001 234 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 CD40LGP29965 261 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 CYP2C18P33260 490 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 MTHFRP42898 656 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 HSD17B12Q53GQ0 312 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 LDLRAP1Q5SW96 308 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 NEPROQ6NW34 567 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 CYP4V2Q6ZWL3 525 aaPredicted RBP5.02□□□□□ -1.61
PCDH9-203ENST00000456367 TRPV3Q8NET8 790 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 OR2T12Q8NG77 320 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 OR5K1Q8NHB7 308 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 CLHC1Q8NHS4 586 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 SLC7A14Q8TBB6 771 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 SLC45A3Q96JT2 553 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 ZNF717Q9BY31 904 aaPredicted RBP5.02□□□□□ -1.61
PCDH9-203ENST00000456367 TXLNGYQ9BZA5 131 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 SLITRK2Q9H156 845 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 NECTIN3Q9NQS3 549 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 PAK6Q9NQU5 681 aaPredicted RBP5.02□□□□□ -1.61
PCDH9-203ENST00000456367 SH3BP4Q9P0V3 963 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 PACSIN3Q9UKS6 424 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 CNOT6Q9ULM6 557 aaKnown RBP5.02□□□□□ -1.61
PCDH9-203ENST00000456367 CSADQ9Y600 493 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 GAKO14976 1311 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 ABCC6O95255 1503 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 AGLP35573 1532 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 ARHGEF33A8MVX0 844 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 ANKRD63C9JTQ0 380 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 J3QRK9 145 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 WNT7AO00755 349 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 PRKACBP22694 351 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 FAUP35544 74 aaKnown RBP5.02□□□□□ -1.61
PCDH9-203ENST00000456367 RARRES1P49788 294 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 KPNA1P52294 538 aaPredicted RBP5.02□□□□□ -1.61
PCDH9-203ENST00000456367 TAS2R40P59535 323 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 YWHAZP63104 245 aaKnown RBP5.02□□□□□ -1.61
PCDH9-203ENST00000456367 DOK7Q18PE1 504 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 HKDC1Q2TB90 917 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 LSM12Q3MHD2 195 aaKnown RBP5.02□□□□□ -1.61
PCDH9-203ENST00000456367 WDR45BQ5MNZ6 344 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 DDI2Q5TDH0 399 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 KIAA1841Q6NSI8 718 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 XKR5Q6UX68 686 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 OTOP1Q7RTM1 612 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 SPPL2CQ8IUH8 684 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 BRSK2Q8IWQ3 736 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 RAB42Q8N4Z0 105 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 DPP10Q8N608 796 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 GMCL1P1Q8NEA9 526 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 RNASE11Q8TAA1 199 aaKnown RBP5.02□□□□□ -1.61
PCDH9-203ENST00000456367 DNAJB14Q8TBM8 379 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 GAB3Q8WWW8 586 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 CELF1Q92879 486 aaKnown RBP5.02□□□□□ -1.61
PCDH9-203ENST00000456367 FBXL8Q96CD0 374 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 APBA2Q99767 749 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 CDHR5Q9HBB8 845 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 NARFQ9UHQ1 456 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 STON1Q9Y6Q2 735 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 FAM47E-STBD1D6RA91 191 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 I3L521 148 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 M0QYT0 321 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 MDM4O15151 490 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 HTRA2O43464 458 aaPredicted RBP5.02□□□□□ -1.61
PCDH9-203ENST00000456367 NUAK1O60285 661 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 PMPCBO75439 489 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 OXSR1O95747 527 aaPredicted RBP5.02□□□□□ -1.61
PCDH9-203ENST00000456367 C2P06681 752 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 GSTT2P0CG29 244 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 GSTT2BP0CG30 244 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 ERVK-10P10266 1014 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 CDH1P12830 882 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 HGFP14210 728 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 PCSK1P29120 753 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 IDH2P48735 452 aaKnown RBP5.02□□□□□ -1.61
PCDH9-203ENST00000456367 HLCSP50747 726 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 LIMK2P53671 638 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 GABARAPL2P60520 117 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 SRP54P61011 504 aaKnown RBP5.02□□□□□ -1.61
PCDH9-203ENST00000456367 VBP1P61758 197 aa5.02□□□□□ -1.61
PCDH9-203ENST00000456367 SLC6A3Q01959 620 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms