RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 ZNF385DQ9H6B1 395 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 EFCAB1Q9HAE3 211 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 UTP6Q9NYH9 597 aaKnown RBP13.4□□□□□ -0.26
LINC00343-203ENST00000454555 KLHL8Q9P2G9 620 aaPredicted RBP13.4□□□□□ -0.26
LINC00343-203ENST00000454555 TLK1Q9UKI8 766 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 PCDHB5Q9Y5E4 795 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 ZCWPW2A0A1B0GU75 182 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 MTMR11A4FU01 709 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 E9PBE3 544 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 TXNDC9O14530 226 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 DCLK1O15075 740 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 KLHL41O60662 606 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 VNN2O95498 520 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 C2P06681 752 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 ME2P23368 584 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 PSMD8P48556 350 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 NUDT2P50583 147 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 CRADDP78560 199 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 PPIDQ08752 370 aaKnown RBP13.4□□□□□ -0.26
LINC00343-203ENST00000454555 ZNF423Q2M1K9 1284 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 SLC9B1Q4ZJI4 515 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 HABP4Q5JVS0 413 aaKnown RBP13.4□□□□□ -0.26
LINC00343-203ENST00000454555 IRAK1BP1Q5VVH5 260 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 KCTD11Q693B1 232 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 LINC00523Q86TU6 105 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 SPATA2LQ8IUW3 424 aaPredicted RBP13.4□□□□□ -0.26
LINC00343-203ENST00000454555 CCDC117Q8IWD4 279 aaPredicted RBP13.4□□□□□ -0.26
LINC00343-203ENST00000454555 DSELQ8IZU8 1212 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 CCNYQ8ND76 341 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 KCTD13Q8WZ19 329 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 GFM2Q969S9 779 aaKnown RBP13.4□□□□□ -0.26
LINC00343-203ENST00000454555 FAR2Q96K12 515 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 NPY6RQ99463 290 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 GBA3Q9H227 469 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 LRRC4Q9HBW1 653 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 RRN3Q9NYV6 651 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 CIDEBQ9UHD4 219 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 DMTF1Q9Y222 760 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 CDYLQ9Y232 598 aa13.4□□□□□ -0.26
LINC00343-203ENST00000454555 TRPC5OSA6NMA1 111 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 EEF2KO00418 725 aaKnown RBP13.39□□□□□ -0.27
LINC00343-203ENST00000454555 TGM5O43548 720 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 DNAJA2O60884 412 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 CLASP2O75122 1294 aaKnown RBP13.39□□□□□ -0.27
LINC00343-203ENST00000454555 BCAS2O75934 225 aaPredicted RBP13.39□□□□□ -0.27
LINC00343-203ENST00000454555 TMCC1O94876 653 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 SMIM18P0DKX4 95 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 LCP1P13796 627 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 MAGEA11P43364 429 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 USP4Q13107 963 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 MAPRE2Q15555 327 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 LRRC36Q1X8D7 754 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 VWA5B1Q5TIE3 1220 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 NAPEPLDQ6IQ20 393 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 B3GNT6Q6ZMB0 384 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 ATG14Q6ZNE5 492 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 CMC1Q7Z7K0 106 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 FAM35AQ86V20 835 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 KCNMB4Q86W47 210 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 HDAC11Q96DB2 347 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 GATA5Q9BWX5 397 aaPredicted RBP13.39□□□□□ -0.27
LINC00343-203ENST00000454555 ACE2Q9BYF1 805 aaPredicted RBP13.39□□□□□ -0.27
LINC00343-203ENST00000454555 RHOJQ9H4E5 214 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 ZBTB26Q9HCK0 441 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 SLC17A6Q9P2U8 582 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 RIMS3Q9UJD0 308 aa13.39□□□□□ -0.27
LINC00343-203ENST00000454555 PRSS51A0A1B0GVH4 220 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 NPHS1O60500 1241 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 CSPG5O95196 566 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 PTPN3P26045 913 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 ADORA2BP29275 332 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 CLCN4P51793 760 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 ATXN1P54253 815 aaKnown RBP13.38□□□□□ -0.27
LINC00343-203ENST00000454555 SLC12A1Q13621 1099 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 PRPSAP1Q14558 356 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 DUSP6Q16828 381 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 FBXL19Q6PCT2 694 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 ADGRD2Q7Z7M1 963 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 FAM131BQ86XD5 332 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 SNX32Q86XE0 403 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 KLHDC8BQ8IXV7 354 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 TCEAL8Q8IYN2 117 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 DEFB106AQ8N104 65 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 AFAP1L2Q8N4X5 818 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 DNAAF3Q8N9W5 541 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 ATAD1Q8NBU5 361 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 OR52K1Q8NGK4 314 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 SLC22A17Q8WUG5 538 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 SMARCD1Q96GM5 515 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 HIC2Q96JB3 615 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 VPS39Q96JC1 886 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 FCRL3Q96P31 734 aaPredicted RBP13.38□□□□□ -0.27
LINC00343-203ENST00000454555 AGAP3Q96P47 875 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 PGLYRP2Q96PD5 576 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 SLC2A13Q96QE2 648 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 CDCA3Q99618 268 aaPredicted RBP13.38□□□□□ -0.27
LINC00343-203ENST00000454555 MED10Q9BTT4 135 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 DUSP16Q9BY84 665 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 CSNK1G1Q9HCP0 422 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 TIMMDC1Q9NPL8 285 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms