RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 SERPINB6P35237 376 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 RXRGP48443 463 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 CSNK1DP48730 415 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 RENBPP51606 427 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 ZNF75DP51815 510 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 BCL2L1Q07817 233 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 NSUN2Q08J23 767 aaKnown RBP eCLIP9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 ELP6Q0PNE2 266 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 ZNF235Q14590 738 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 UGP2Q16851 508 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 TMEM52BQ4KMG9 183 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 ANKRD20A8PQ5CZ79 823 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 NCBP2-AS2Q69YL0 99 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 GLRX5Q86SX6 157 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 PGBD5Q8N414 524 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 TC2NQ8N9U0 490 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 PCDH19Q8TAB3 1148 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 FAM71BQ8TC56 605 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 LRRN4Q8WUT4 740 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 NSMCE3Q96MG7 304 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 ZNF641Q96N77 438 aaPredicted RBP9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 ZNF599Q96NL3 588 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 LENG8Q96PV6 779 aaPredicted RBP9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 TUBGCP5Q96RT8 1024 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 KLF6Q99612 283 aaPredicted RBP9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 PCDH12Q9NPG4 1184 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 MBNL1Q9NR56 388 aaKnown RBP9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 TOR4AQ9NXH8 423 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 RCOR3Q9P2K3 495 aaPredicted RBP9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 SEPT3Q9UH03 358 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 LRP4O75096 1905 aa9.54□□□□□ -0.88
CDC42EP3-203ENST00000453555 TSPAN11A1L157 253 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 A8MX80 341 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 ENC1O14682 589 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 PEX11BO96011 259 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 KRT7P08729 469 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 KDELR1P24390 212 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 MAN1A1P33908 653 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 IGFALSP35858 605 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 MAGEA1P43355 309 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 MAXP61244 160 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 ITKQ08881 620 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 DNAJC3Q13217 504 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 PDE1CQ14123 709 aaPredicted RBP9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 PAFAH1B3Q15102 231 aaKnown RBP9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 PDK2Q15119 407 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 TPRG1LQ5T0D9 272 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 MARC1Q5VT66 337 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 ERAP2Q6P179 960 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 BRAT1Q6PJG6 821 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 KYAT3Q6YP21 454 aaKnown RBP9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 KANSL1Q7Z3B3 1105 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 RAB44Q7Z6P3 723 aaPredicted RBP9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 ZSCAN30Q86W11 494 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 GAS2L3Q86XJ1 694 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 MAP7D3Q8IWC1 876 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 RHOT2Q8IXI1 618 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 HCAR2Q8TDS4 363 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 PDCD6IPQ8WUM4 868 aaKnown RBP9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 NSMCE1Q8WV22 266 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 ASB12Q8WXK4 309 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 ADAMTS14Q8WXS8 1223 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 RFFLQ8WZ73 363 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 RAPGEF5Q92565 580 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 CENPTQ96BT3 561 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 CNDP2Q96KP4 475 aaKnown RBP9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 PSKH2Q96QS6 385 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 ZNF670Q9BS34 389 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 NT5MQ9NPB1 228 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 UCKL1Q9NWZ5 548 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 DNAJC28Q9NX36 388 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 LCMT1Q9UIC8 334 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 TFR2Q9UP52 801 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 HYOU1Q9Y4L1 999 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 PCDHGC4Q9Y5F7 938 aa9.53□□□□□ -0.88
CDC42EP3-203ENST00000453555 ARID1BQ8NFD5 2236 aaPredicted RBP9.52□□□□□ -0.88
CDC42EP3-203ENST00000453555 SPTY2D1-AS1A0A0U1RR47 76 aa9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 LRRD1A4D1F6 860 aa9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 TRAFD1O14545 582 aaPredicted RBP9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 FFAR2O15552 330 aa9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 LZTS3O60299 673 aaPredicted RBP9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 C6P13671 934 aa9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 DGKAP23743 735 aa9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 MMP12P39900 470 aa9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 GARSP41250 739 aaKnown RBP9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 ARHGAP25P42331 645 aa9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 MMP13P45452 471 aa9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 NOP2P46087 812 aaKnown RBP9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 RABIFP47224 123 aa9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 LIG3P49916 1009 aa9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 SUOXP51687 545 aa9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 AP1S1P61966 158 aa9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 GALNT2Q10471 571 aa9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 FZD2Q14332 565 aa9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 IRF4Q15306 451 aa9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 UNQ6494/PRO21346Q6UXR6 183 aa9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 MARCH9Q86YJ5 346 aa9.52□□□□□ -0.89
CDC42EP3-203ENST00000453555 DCP2Q8IU60 420 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms