RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 DNAJB4Q9UDY4 337 aa11.25□□□□□ -0.61
DDR1-239ENST00000452441 CASQ2O14958 399 aaPredicted RBP11.24□□□□□ -0.61
DDR1-239ENST00000452441 AP2A1O95782 977 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 CKMT2P17540 419 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 NFKBIAP25963 317 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 HARS2P49590 506 aaKnown RBP11.24□□□□□ -0.61
DDR1-239ENST00000452441 PDK3Q15120 406 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 UGP2Q16851 508 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 ZNF697Q5TEC3 545 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 DENND1CQ8IV53 801 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 HOMEZQ8IX15 550 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 DOCK3Q8IZD9 2030 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 ASCC3Q8N3C0 2202 aaKnown RBP11.24□□□□□ -0.61
DDR1-239ENST00000452441 MPP4Q96JB8 637 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 TMEM79Q9BSE2 394 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 IL22Q9GZX6 179 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 ETAA1Q9NY74 926 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 WARS2Q9UGM6 360 aaKnown RBP11.24□□□□□ -0.61
DDR1-239ENST00000452441 GIT1Q9Y2X7 761 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 RP1L1Q8IWN7 2480 aaPredicted RBP11.24□□□□□ -0.61
DDR1-239ENST00000452441 HACD1B0YJ81 288 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 BIRC5O15392 142 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 SRP72O76094 671 aaKnown RBP11.24□□□□□ -0.61
DDR1-239ENST00000452441 IL1BP01584 269 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 SLC1A2P43004 574 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 GEMP55040 296 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 POLD3Q15054 466 aaPredicted RBP11.24□□□□□ -0.61
DDR1-239ENST00000452441 NFE2Q16621 373 aaPredicted RBP11.24□□□□□ -0.61
DDR1-239ENST00000452441 CCDC153Q494R4 210 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 INTS6LQ5JSJ4 861 aaKnown RBP11.24□□□□□ -0.61
DDR1-239ENST00000452441 C16orf89Q6UX73 402 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 ARCQ7LC44 396 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 C14orf80Q86SX3 495 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 LPCAT1Q8NF37 534 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 CASP10Q92851 521 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 NOL11Q9H8H0 719 aaKnown RBP11.24□□□□□ -0.61
DDR1-239ENST00000452441 ABCC13Q9NSE7 274 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 BCAP29Q9UHQ4 241 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 MTF2Q9Y483 593 aaPredicted RBP11.24□□□□□ -0.61
DDR1-239ENST00000452441 DOCK1Q14185 1865 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 NUP214P35658 2090 aaPredicted RBP11.24□□□□□ -0.61
DDR1-239ENST00000452441 SCN1AP35498 2009 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 CLIC3O95833 236 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 CHRNA1P02708 482 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 MBL2P11226 248 aaPredicted RBP11.24□□□□□ -0.61
DDR1-239ENST00000452441 TPSB2P20231 275 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 ME2P23368 584 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 SLC10A7Q0GE19 358 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 TPSAB1Q15661 275 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 CNPY1Q3B7I2 92 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 ZNF534Q76KX8 674 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 ZNF598Q86UK7 904 aaKnown RBP11.24□□□□□ -0.61
DDR1-239ENST00000452441 ATP6V0D2Q8N8Y2 350 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 CXorf38Q8TB03 319 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 DDI1Q8WTU0 396 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 LIN28AQ9H9Z2 209 aaKnown RBP11.24□□□□□ -0.61
DDR1-239ENST00000452441 ADAMTS6Q9UKP5 1117 aa11.24□□□□□ -0.61
DDR1-239ENST00000452441 F5H5T6 163 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 MRASO14807 208 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 SEPT4O43236 478 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 SH3BP5O60239 455 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 CNTN5O94779 1100 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 TRIM16O95361 564 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 UGT1A6P19224 532 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 NR4A1P22736 598 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 RPL10P27635 214 aaKnown RBP11.23□□□□□ -0.61
DDR1-239ENST00000452441 CRABP2P29373 138 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 CPOXP36551 454 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 LIMK2P53671 638 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 RAB10P61026 200 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 DDX39BQ13838 428 aaKnown RBP11.23□□□□□ -0.61
DDR1-239ENST00000452441 VPS26BQ4G0F5 336 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 LIN52Q52LA3 116 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 TMTC4Q5T4D3 741 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 AGAP9Q5VTM2 703 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 FAM91A1Q658Y4 838 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 MAMDC4Q6UXC1 1216 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 ZBTB49Q6ZSB9 765 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 ZNF467Q7Z7K2 595 aaPredicted RBP11.23□□□□□ -0.61
DDR1-239ENST00000452441 LINC00523Q86TU6 105 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 TTC9BQ8N6N2 239 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 PTGR2Q8N8N7 351 aaPredicted RBP11.23□□□□□ -0.61
DDR1-239ENST00000452441 TBCDQ9BTW9 1192 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 TMLHEQ9NVH6 421 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 SUN2Q9UH99 717 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 RNF112Q9ULX5 631 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 FFAR3O14843 346 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 GPR42O15529 346 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 VCLP18206 1134 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 AOC1P19801 751 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 ITGAXP20702 1163 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 CNTFP26441 200 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 SLC7A2P52569 658 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 PRKAA1Q13131 559 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 VEPH1Q14D04 833 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 UBXN11Q5T124 520 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 OTOP2Q7RTS6 562 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 RASAL3Q86YV0 1011 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 CEP97Q8IW35 865 aa11.23□□□□□ -0.61
DDR1-239ENST00000452441 KCNA7Q96RP8 456 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms